Literature DB >> 8552646

X-ray structure of a vanadium-containing enzyme: chloroperoxidase from the fungus Curvularia inaequalis.

A Messerschmidt1, R Wever.   

Abstract

The chloroperoxidase (EC 1.11.1.-) from the fungus Curvularia inaequalis belongs to a class of vanadium enzymes that oxidize halides in the presence of hydrogen peroxide to the corresponding hypohalous acids. The 2.1 A crystal structure (R = 20%) of an azide chloroperoxidase complex reveals the geometry of the catalytic vanadium center. Azide coordinates directly to the metal center, resulting in a structure with azide, three nonprotein oxygens, and a histidine as ligands. In the native state vanadium will be bound as hydrogen vanadate(V) in a trigonal bipyramidal coordination with the metal coordinated to three oxygens in the equatorial plane, to the OH group at one apical position, and to the epsilon 2 nitrogen of a histidine at the other apical position. The protein fold is mainly alpha-helical with two four-helix bundles as main structural motifs and an overall structure different from other structures. The helices pack together to a compact molecule, which explains the high stability of the protein. An amino acid sequence comparison with vanadium-containing bromoperoxidase from the seaweed Ascophyllum nodosum shows high similarities in the regions of the metal binding site, with all hydrogen vanadate(V) interacting residues conserved except for lysine-353, which is an asparagine.

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Year:  1996        PMID: 8552646      PMCID: PMC40244          DOI: 10.1073/pnas.93.1.392

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Crystal structure of a bacterial non-haem iron hydroxylase that catalyses the biological oxidation of methane.

Authors:  A C Rosenzweig; C A Frederick; S J Lippard; P Nordlund
Journal:  Nature       Date:  1993-12-09       Impact factor: 49.962

2.  Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features.

Authors:  W Kabsch; C Sander
Journal:  Biopolymers       Date:  1983-12       Impact factor: 2.505

3.  The stereochemistry of peroxidase catalysis.

Authors:  T L Poulos; J Kraut
Journal:  J Biol Chem       Date:  1980-09-10       Impact factor: 5.157

4.  Vanadium K-edge X-ray absorption spectroscopy of bromoperoxidase from Ascophyllum nodosum.

Authors:  J M Arber; E de Boer; C D Garner; S S Hasnain; R Wever
Journal:  Biochemistry       Date:  1989-09-19       Impact factor: 3.162

5.  Crystal structure of calcium-depleted Bacillus licheniformis alpha-amylase at 2.2 A resolution.

Authors:  M Machius; G Wiegand; R Huber
Journal:  J Mol Biol       Date:  1995-03-03       Impact factor: 5.469

6.  Crystallographic and fluorescence studies of the interaction of haloalkane dehalogenase with halide ions. Studies with halide compounds reveal a halide binding site in the active site.

Authors:  K H Verschueren; J Kingma; H J Rozeboom; K H Kalk; D B Janssen; B W Dijkstra
Journal:  Biochemistry       Date:  1993-09-07       Impact factor: 3.162

7.  The stability and steady-state kinetics of vanadium chloroperoxidase from the fungus Curvularia inaequalis.

Authors:  J W Van Schijndel; P Barnett; J Roelse; E G Vollenbroek; R Wever
Journal:  Eur J Biochem       Date:  1994-10-01

8.  The metal-ion-free oxidoreductase from Streptomyces aureofaciens has an alpha/beta hydrolase fold.

Authors:  H J Hecht; H Sobek; T Haag; O Pfeifer; K H van Pée
Journal:  Nat Struct Biol       Date:  1994-08

9.  Primary structure and characterization of the vanadium chloroperoxidase from the fungus Curvularia inaequalis.

Authors:  B H Simons; P Barnett; E G Vollenbroek; H L Dekker; A O Muijsers; A Messerschmidt; R Wever
Journal:  Eur J Biochem       Date:  1995-04-15

10.  Using known substructures in protein model building and crystallography.

Authors:  T A Jones; S Thirup
Journal:  EMBO J       Date:  1986-04       Impact factor: 11.598

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  35 in total

1.  X-ray structures of a novel acid phosphatase from Escherichia blattae and its complex with the transition-state analog molybdate.

Authors:  K Ishikawa; Y Mihara; K Gondoh; E Suzuki; Y Asano
Journal:  EMBO J       Date:  2000-06-01       Impact factor: 11.598

2.  Modification of halogen specificity of a vanadium-dependent bromoperoxidase.

Authors:  Takashi Ohshiro; Jennifer Littlechild; Esther Garcia-Rodriguez; Michail N Isupov; Yasuaki Iida; Takushi Kobayashi; Yoshikazu Izumi
Journal:  Protein Sci       Date:  2004-05-07       Impact factor: 6.725

3.  Application of DFT methods to the study of the coordination environment of the VO2+ ion in V proteins.

Authors:  Daniele Sanna; Vincent L Pecoraro; Giovanni Micera; Eugenio Garribba
Journal:  J Biol Inorg Chem       Date:  2012-04-15       Impact factor: 3.358

4.  Enhancing effect of calcium and vanadium ions on thermal stability of bromoperoxidase from Corallina pilulifera.

Authors:  Esther Garcia-Rodriguez; Takashi Ohshiro; Toshiaki Aibara; Yoshikazu Izumi; Jennifer Littlechild
Journal:  J Biol Inorg Chem       Date:  2005-03-18       Impact factor: 3.358

Review 5.  Exploring the chemistry and biology of vanadium-dependent haloperoxidases.

Authors:  Jaclyn M Winter; Bradley S Moore
Journal:  J Biol Chem       Date:  2009-04-10       Impact factor: 5.157

6.  Identification of a novel phosphatase sequence motif.

Authors:  J Stukey; G M Carman
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

7.  Computational approaches to shed light on molecular mechanisms in biological processes.

Authors:  Giorgio Moro; Laura Bonati; Maurizio Bruschi; Ugo Cosentino; Luca De Gioia; Pier Carlo Fantucci; Alessandro Pandini; Elena Papaleo; Demetrio Pitea; Gloria A A Saracino; Giuseppe Zampella
Journal:  Theor Chem Acc       Date:  2007-05-01       Impact factor: 1.702

8.  Conserved residues in membrane-bound acid pyrophosphatase from Sulfolobus tokodaii, a thermoacidophilic archaeon.

Authors:  Fumitoshi Manabe; Hirofumi Shoun; Takayoshi Wakagi
Journal:  Extremophiles       Date:  2011-04-02       Impact factor: 2.395

9.  An unexpected structural relationship between integral membrane phosphatases and soluble haloperoxidases.

Authors:  A F Neuwald
Journal:  Protein Sci       Date:  1997-08       Impact factor: 6.725

10.  Vanadium-dependent iodoperoxidases in Laminaria digitata, a novel biochemical function diverging from brown algal bromoperoxidases.

Authors:  Carole Colin; Catherine Leblanc; Gurvan Michel; Elsa Wagner; Emmanuelle Leize-Wagner; Alain Van Dorsselaer; Philippe Potin
Journal:  J Biol Inorg Chem       Date:  2005-03-04       Impact factor: 3.358

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