Literature DB >> 8536985

Distribution of unlinked transpositions of a Ds element from a T-DNA locus on tomato chromosome 4.

J Bríza1, B J Carroll, V I Klimyuk, C M Thomas, D A Jones, J D Jones.   

Abstract

In maize, receptor sites for unlinked transpositions of Activator (Ac) elements are not distributed randomly. To test whether the same is true in tomato, the receptor sites for a Dissociation (Ds) element derived from Ac, were mapped for 26 transpositions unlinked to a donor T-DNA locus on chromosome 4. Four independent transposed Dss mapped to sites on chromosome 4 genetically unlinked to the donor T-DNA, consistent with a preference for transposition to unlinked sites on the same chromosome as opposed to sites on other chromosomes. There was little preference among the nondonor chromosomes, except perhaps for chromosome 2, which carried seven transposed Dss, but these could not be proven to be independent. However, these data, when combined with those from other studies in tomato examining the distribution of transposed Acs or Dss among nondonor chromosomes, suggest there may be absolute preferences for transposition irrespective of the chromosomal location of the donor site. If true, transposition to nondonor chromosomes in tomato would differ from that in maize, where the preference seems to be determined by the spatial arrangement of chromosomes in the interphase nucleus. The tomato lines carrying Ds elements at known locations are available for targeted transposon tagging experiments.

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Year:  1995        PMID: 8536985      PMCID: PMC1206735     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  30 in total

1.  High density molecular linkage maps of the tomato and potato genomes.

Authors:  S D Tanksley; M W Ganal; J P Prince; M C de Vicente; M W Bonierbale; P Broun; T M Fulton; J J Giovannoni; S Grandillo; G B Martin
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

2.  Cloning of the bronze locus in maize by a simple and generalizable procedure using the transposable controlling element Activator (Ac).

Authors:  N V Fedoroff; D B Furtek; O E Nelson
Journal:  Proc Natl Acad Sci U S A       Date:  1984-06       Impact factor: 11.205

3.  A procedure for in vitro amplification of DNA segments that lie outside the boundaries of known sequences.

Authors:  T Triglia; M G Peterson; D J Kemp
Journal:  Nucleic Acids Res       Date:  1988-08-25       Impact factor: 16.971

4.  Analysis of the chromosomal distribution of transposon-carrying T-DNAs in tomato using the inverse polymerase chain reaction.

Authors:  C M Thomas; D A Jones; J J English; B J Carroll; J L Bennetzen; K Harrison; A Burbidge; G J Bishop; J D Jones
Journal:  Mol Gen Genet       Date:  1994-03

5.  Linked and unlinked transposition of a genetically marked Dissociation element in transgenic tomato.

Authors:  J Healy; C Corr; J DeYoung; B Baker
Journal:  Genetics       Date:  1993-06       Impact factor: 4.562

6.  Genomic sequencing.

Authors:  G M Church; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

7.  Transposition of the maize controlling element "Activator" in tobacco.

Authors:  B Baker; J Schell; H Lörz; N Fedoroff
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

8.  Transgenic tomato lines containing Ds elements at defined genomic positions as tools for targeted transposon tagging.

Authors:  S Knapp; Y Larondelle; M Rossberg; D Furtek; K Theres
Journal:  Mol Gen Genet       Date:  1994-06-15

9.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736

10.  Molecular cloning of the a1 locus of Zea mays using the transposable elements En and Mu1.

Authors:  C O'Reilly; N S Shepherd; A Pereira; Z Schwarz-Sommer; I Bertram; D S Robertson; P A Peterson; H Saedler
Journal:  EMBO J       Date:  1985-04       Impact factor: 11.598

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  6 in total

1.  A deep-coverage tomato BAC library and prospects toward development of an STC framework for genome sequencing.

Authors:  M A Budiman; L Mao; T C Wood; R A Wing
Journal:  Genome Res       Date:  2000-01       Impact factor: 9.043

2.  Site-selected insertional mutagenesis of tomato with maize Ac and Ds elements.

Authors:  M B Cooley; A P Goldsbrough; D W Still; J I Yoder
Journal:  Mol Gen Genet       Date:  1996-08-27

3.  An Efficient System for Ds Transposon Tagging in Brachypodium distachyon.

Authors:  Hongyu Wu; Xiaodong Xue; Caihua Qin; Yi Xu; Yuyu Guo; Xiang Li; Wei Lv; Qinxia Li; Chuangxue Mao; Luzhao Li; Suzhen Zhao; Xiaoquan Qi; Hailong An
Journal:  Plant Physiol       Date:  2019-03-13       Impact factor: 8.340

4.  An active ac/ds transposon system for activation tagging in tomato cultivar m82 using clonal propagation.

Authors:  Jared D Carter; Andy Pereira; Allan W Dickerman; Richard E Veilleux
Journal:  Plant Physiol       Date:  2013-04-08       Impact factor: 8.340

Review 5.  Arabidopsis genome sequence as a tool for functional genomics in tomato.

Authors:  K S Mysore; R P Tuori; G B Martin
Journal:  Genome Biol       Date:  2001-01-12       Impact factor: 13.583

Review 6.  Application of Genome Editing in Tomato Breeding: Mechanisms, Advances, and Prospects.

Authors:  Hymavathi Salava; Sravankumar Thula; Vijee Mohan; Rahul Kumar; Fatemeh Maghuly
Journal:  Int J Mol Sci       Date:  2021-01-12       Impact factor: 5.923

  6 in total

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