Literature DB >> 8532520

Transition state stabilization by the 'high' motif of class I aminoacyl-tRNA synthetases: the case of Escherichia coli methionyl-tRNA synthetase.

E Schmitt1, M Panvert, S Blanquet, Y Mechulam.   

Abstract

Methionyl-tRNA synthetase belongs to the class I aminoacyl-tRNA synthetase family characterized both by a catalytic center built around a Rossmann Fold and by the presence of the two peptidic marker sequences HIGH and KMSKS. In this study, the role of the 21HLGH24 motif of Escherichia coli methionyl-tRNA synthetase was studied in a systematic fashion by site-directed mutagenesis. It is shown that the two histidine residues play a crucial role in the catalysis of the methionyl adenylate formation by participating in the stabilisation of the ATP phosphate chain during the transition state. Moreover, the results suggest the involvement of the epsilon-imino group of histidine 21 and of the delta-imino group of histidine 24. Notably, the substitution of either the leucine or the glycine residue of the HLGH motif by alanine had no effect on the catalysis. From the data and from other studies with class I aminoacyl-tRNA synthetases, concomitant positive contributions of the HIGH and KMSKS sequences to reach the transition state of aminoacyl adenylate formation can be envisaged.

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Year:  1995        PMID: 8532520      PMCID: PMC307466          DOI: 10.1093/nar/23.23.4793

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  34 in total

1.  GLUTAMYL AND GLUTAMINYL RIBONUCLEIC ACID SYNTHETASES OF ESCHERICHIA COLI W. SEPARATION, PROPERTIES, AND STIMULATION OF ADENOSINE TRIPHOSPHATE-PYROPHOSPHATE EXCHANGE BY ACCEPTOR RIBONUCLEIC ACID.

Authors:  J M RAVEL; S F WANG; C HEINEMEYER; W SHIVE
Journal:  J Biol Chem       Date:  1965-01       Impact factor: 5.157

2.  The amino acid activation reaction catalyzed by methionyl-transfer rna synthetase: evidence for synergistic coupling between the sites for methionine adenosine and pyrophosphate.

Authors:  S Blanquet; G Fayat; J P Waller
Journal:  J Mol Biol       Date:  1975-05-05       Impact factor: 5.469

3.  Couplings between the sites for methionine and adenosine 5'-triphosphate in the amino acid activation reaction catalyzed by trypsin-modified methionyl-transfer RNA synthetase from Escherichia coli.

Authors:  G Fayat; M Fromant; S Blanquet
Journal:  Biochemistry       Date:  1977-05-31       Impact factor: 3.162

4.  The mechanism of action of methionyl-tRNA synthetase. 2. Interaction of the enzyme with specific and unspecific tRNAs.

Authors:  S Blanquet; G Petrissant; J P Waller
Journal:  Eur J Biochem       Date:  1973-07-02

5.  Chemical and biological evolution of nucleotide-binding protein.

Authors:  M G Rossmann; D Moras; K W Olsen
Journal:  Nature       Date:  1974-07-19       Impact factor: 49.962

6.  The mechanism of action of methionyl-tRNA synthetase from Escherichia coli. Mechanism of the amino-acid activation reaction catalyzed by the native and the trypsin-modified enzymes.

Authors:  S Blanquet; G Fayat; J P Waller
Journal:  Eur J Biochem       Date:  1974-05-15

7.  Modification of methionyl-tRNA synthetase by proteolytic cleavage and properties of the trypsin-modified enzyme.

Authors:  D Cassio; J P Waller
Journal:  Eur J Biochem       Date:  1971-05-28

8.  Conserved cysteine and histidine residues in the structures of the tyrosyl and methionyl-tRNA synthetases.

Authors:  D G Barker; G Winter
Journal:  FEBS Lett       Date:  1982-08-23       Impact factor: 4.124

9.  Methionyl-tRNA synthetase from Escherichia coli: active stoichiometry and stopped-flow analysis of methionyl adenylate formaiton.

Authors:  F Hyafil; Y Jacques; G Fayat; M Fromant; P Dessen; S Blanquet
Journal:  Biochemistry       Date:  1976-08-24       Impact factor: 3.162

10.  Specific sequence homology and three-dimensional structure of an aminoacyl transfer RNA synthetase.

Authors:  T Webster; H Tsai; M Kula; G A Mackie; P Schimmel
Journal:  Science       Date:  1984-12-14       Impact factor: 47.728

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Review 5.  MD Simulations of tRNA and Aminoacyl-tRNA Synthetases: Dynamics, Folding, Binding, and Allostery.

Authors:  Rongzhong Li; Lindsay M Macnamara; Jessica D Leuchter; Rebecca W Alexander; Samuel S Cho
Journal:  Int J Mol Sci       Date:  2015-07-13       Impact factor: 5.923

6.  Clone and functional analysis of Seryl-tRNA synthetase and Tyrosyl-tRNA synthetase from silkworm, Bombyx mori.

Authors:  Jingsheng Hu; Jianghai Tian; Fanchi Li; Bin Xue; Jiahuan Hu; Xiaoyu Cheng; Jinxin Li; Weide Shen; Bing Li
Journal:  Sci Rep       Date:  2017-01-30       Impact factor: 4.379

7.  Backbone Brackets and Arginine Tweezers delineate Class I and Class II aminoacyl tRNA synthetases.

Authors:  Florian Kaiser; Sebastian Bittrich; Sebastian Salentin; Christoph Leberecht; V Joachim Haupt; Sarah Krautwurst; Michael Schroeder; Dirk Labudde
Journal:  PLoS Comput Biol       Date:  2018-04-16       Impact factor: 4.475

  7 in total

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