Literature DB >> 8521051

SAMSON: a software package for the biopolymer primary structure analysis.

N N Nazipova1, S A Shabalina, A S Kondrashov, M A Roytberg, G V Buryakov, S E Vernoslov.   

Abstract

The SAMSON package is a tool for advanced analysis of primary DNA, RNA and protein structures. The package consists of 16 programs performing statistical analysis and comparison of biopolymer sequences, search for homologies, translation of DNA and RNA sequences into amino acid sequences, splicing of RNA sequences and restriction map construction, recognition of functionally related sites in biopolymer molecules, textual analysis of DNA and RNA regulatory sites and prediction of intermolecular hybridization sites in DNA and RNA molecules.

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Year:  1995        PMID: 8521051     DOI: 10.1093/bioinformatics/11.4.423

Source DB:  PubMed          Journal:  Comput Appl Biosci        ISSN: 0266-7061


  4 in total

1.  Regulation of biosynthesis of individual cellulases in Thermomonospora fusca.

Authors:  N A Spiridonov; D B Wilson
Journal:  J Bacteriol       Date:  1998-07       Impact factor: 3.490

2.  Association of polymorphisms in odorant-binding protein genes with variation in olfactory response to benzaldehyde in Drosophila.

Authors:  Ping Wang; Richard F Lyman; Svetlana A Shabalina; Trudy F C Mackay; Robert R H Anholt
Journal:  Genetics       Date:  2007-08-24       Impact factor: 4.562

3.  Low enzymatic activity haplotypes of the human catechol-O-methyltransferase gene: enrichment for marker SNPs.

Authors:  Andrea G Nackley; Svetlana A Shabalina; Jason E Lambert; Mathew S Conrad; Dustin G Gibson; Alexey N Spiridonov; Sarah K Satterfield; Luda Diatchenko
Journal:  PLoS One       Date:  2009-04-13       Impact factor: 3.240

4.  Expression patterns of protein kinases correlate with gene architecture and evolutionary rates.

Authors:  Aleksey Y Ogurtsov; Leonardo Mariño-Ramírez; Gibbes R Johnson; David Landsman; Svetlana A Shabalina; Nikolay A Spiridonov
Journal:  PLoS One       Date:  2008-10-31       Impact factor: 3.240

  4 in total

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