Literature DB >> 8508955

Functional display of human plasminogen-activator inhibitor 1 (PAI-1) on phages: novel perspectives for structure-function analysis by error-prone DNA synthesis.

H Pannekoek1, M van Meijer, R R Schleef, D J Loskutoff, C F Barbas.   

Abstract

The synthesis of the human plasminogen-activator inhibitor 1 (PAI-1) protein in the cytoplasm of transformed Escherichia coli cells results in inactive protein preparations that can be activated by denaturation and renaturation. We have used the phagemid pComb3, designed for combinatorial immunoglobulin repertoire cloning, for routing of PAI-1 to the periplasm and subsequent exposure on the surface of filamentous phages. Phage-displayed PAI-1 specifically binds to immobilized polyclonal and monoclonal anti-human PAI-1 antibodies. In addition, PAI-1 retains its capacity to form equimolar complexes with its target serine protease tissue-type plasminogen activator (t-PA), as well as its ability to inhibit t-PA activity. Finally, we have explored and manipulated the error-prone property of TaqI DNA polymerase during PCR amplification of the full-length PAI-1 cDNA to generate a large library of predominantly single, random PAI-1 mutants. In addition, a computer simulation program has been devised that converts the number of mutations per codogenic region (in this case PAI-1) into actual mutant proteins. The PAI-1-phage mutant library is composed of 46% single and 34% double mutants and 20% wild-type PAI-1 and can be employed to isolate mutants defective in interactions of PAI-1 with other components. The method described here is applicable to other studies on the structure-function analysis of eukaryotic proteins.

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Year:  1993        PMID: 8508955     DOI: 10.1016/0378-1119(93)90164-x

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  9 in total

1.  Functional display of proteins, mutant proteins, fragments of proteins and peptides on the surface of filamentous (bacterio) phages: A review.

Authors:  H Pannekoek; M van Meijer; H Gaardsvoll; A J van Zonneveld
Journal:  Cytotechnology       Date:  1995-01       Impact factor: 2.058

Review 2.  The basic structure of filamentous phage and its use in the display of combinatorial peptide libraries.

Authors:  S Cabilly
Journal:  Mol Biotechnol       Date:  1999-09       Impact factor: 2.695

Review 3.  Selection of proteins and peptides from libraries displayed on filamentous bacteriophage.

Authors:  D McGregor
Journal:  Mol Biotechnol       Date:  1996-10       Impact factor: 2.695

Review 4.  Protein-protein interactions: methods for detection and analysis.

Authors:  E M Phizicky; S Fields
Journal:  Microbiol Rev       Date:  1995-03

Review 5.  Phage display of enzymes and in vitro selection for catalytic activity.

Authors:  P Soumillion; L Jespers; M Bouchet; J Marchand-Brynaert; P Sartiaux; J Fastrez
Journal:  Appl Biochem Biotechnol       Date:  1994 May-Jun       Impact factor: 2.926

Review 6.  Display technologies: application for the discovery of drug and gene delivery agents.

Authors:  Anna Sergeeva; Mikhail G Kolonin; Jeffrey J Molldrem; Renata Pasqualini; Wadih Arap
Journal:  Adv Drug Deliv Rev       Date:  2006-10-06       Impact factor: 15.470

7.  Deep mutational scanning of the plasminogen activator inhibitor-1 functional landscape.

Authors:  Zachary M Huttinger; Laura M Haynes; Andrew Yee; Colin A Kretz; Matthew L Holding; David R Siemieniak; Daniel A Lawrence; David Ginsburg
Journal:  Sci Rep       Date:  2021-09-22       Impact factor: 4.379

8.  Phage display of the serpin alpha-1 proteinase inhibitor randomized at consecutive residues in the reactive centre loop and biopanned with or without thrombin.

Authors:  Benjamin M Scott; Wadim L Matochko; Richard F Gierczak; Varsha Bhakta; Ratmir Derda; William P Sheffield
Journal:  PLoS One       Date:  2014-01-10       Impact factor: 3.240

9.  Identification of an alpha-1 antitrypsin variant with enhanced specificity for factor XIa by phage display, bacterial expression, and combinatorial mutagenesis.

Authors:  Varsha Bhakta; Mostafa Hamada; Amy Nouanesengsy; Jessica Lapierre; Darian L Perruzza; William P Sheffield
Journal:  Sci Rep       Date:  2021-03-10       Impact factor: 4.379

  9 in total

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