Literature DB >> 8479915

The preprotachykinin A promoter interacts with a sequence specific single stranded DNA binding protein.

J P Quinn1, J McAllister.   

Abstract

An element within the Preprotachykinin A (PPT) promoter is highly homologous to an element from the rat type II Na channel promoter. This Na Channel element has been previously proposed to be common to a number of neuronal genes. We demonstrate that the PPT element binds a sequence specific DNA binding protein. The protein binds to only one strand of the PPT element and has little or no specificity for the double stranded DNA species. Gel retardation analysis indicates that the protein is found in both rat neuronal tissue and adult dorsal root ganglia neurons in culture but not in established tissue culture cell lines. Using the PPT element linked to magnetic beads we have been able to demonstrate the enrichment of a protein with a molecular weight of 40k with that of the binding activity. A mechanism for protein binding to the DNA is proposed based on the fact that the region binding the protein is the loop of a larger stem-loop structure in the DNA.

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Year:  1993        PMID: 8479915      PMCID: PMC309374          DOI: 10.1093/nar/21.7.1637

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  23 in total

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Authors:  H C Stark; O Weinberger; J Weinberger
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Authors:  M F Laspia; A P Rice; M B Mathews
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5.  Tat trans-activates the human immunodeficiency virus through a nascent RNA target.

Authors:  B Berkhout; R H Silverman; K T Jeang
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Review 7.  Tachykinins.

Authors:  J E Maggio
Journal:  Annu Rev Neurosci       Date:  1988       Impact factor: 12.449

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Authors:  F Strauss; A Varshavsky
Journal:  Cell       Date:  1984-07       Impact factor: 41.582

9.  Eukaryotic gene transcription with purified components.

Authors:  J D Dignam; P L Martin; B S Shastry; R G Roeder
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

10.  DNA-dependent transcription of adenovirus genes in a soluble whole-cell extract.

Authors:  J L Manley; A Fire; A Cano; P A Sharp; M L Gefter
Journal:  Proc Natl Acad Sci U S A       Date:  1980-07       Impact factor: 11.205

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  3 in total

1.  Single-strand-DNA-binding factors specifically recognize the pyrimidine element in the chick alpha2(I) collagen gene promoter.

Authors:  D Bayarsaihan; L N Lukens
Journal:  Biochem J       Date:  1996-02-15       Impact factor: 3.857

2.  Interaction of two sequence-specific single-stranded DNA-binding proteins with an essential region of the beta-casein gene promoter is regulated by lactogenic hormones.

Authors:  S Altiok; B Groner
Journal:  Mol Cell Biol       Date:  1993-12       Impact factor: 4.272

3.  A silencer element for the lipoprotein lipase gene promoter and cognate double- and single-stranded DNA-binding proteins.

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Journal:  Mol Cell Biol       Date:  1995-01       Impact factor: 4.272

  3 in total

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