Literature DB >> 8470370

Gene A32 product of vaccinia virus may be an ATPase involved in viral DNA packaging as indicated by sequence comparisons with other putative viral ATPases.

E V Koonin1, T G Senkevich, V I Chernos.   

Abstract

Statistically significant sequence similarity was revealed between the gene A32 product of vaccinia virus (VV), gene I products (gpI) of filamentous single-stranded DNA bacteriophages, and IVa2 gene products of adenoviruses. Four conserved sequence motifs were delineated, the two N-proximal of which correspond to the A and B motifs of the purine NTP-binding pattern. Based on the role of gpI and IVa2 proteins in virion morphogenesis, and on the conservation of the NTP-binding pattern in these proteins, we hypothesize that the A32 gene product might be involved in an ATP-consuming function in VV virion formation, e.g., packaging of the DNA in the virus particle.

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Year:  1993        PMID: 8470370     DOI: 10.1007/bf01702351

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  21 in total

1.  Nucleotide sequence of 42 kbp of vaccinia virus strain WR from near the right inverted terminal repeat.

Authors:  G L Smith; Y S Chan; S T Howard
Journal:  J Gen Virol       Date:  1991-06       Impact factor: 3.891

Review 2.  Viral proteins containing the purine NTP-binding sequence pattern.

Authors:  A E Gorbalenya; E V Koonin
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

3.  Rapid and sensitive protein similarity searches.

Authors:  D J Lipman; W R Pearson
Journal:  Science       Date:  1985-03-22       Impact factor: 47.728

4.  An amino acid sequence which directs membrane insertion causes loss of membrane potential.

Authors:  J I Horabin; R E Webster
Journal:  J Biol Chem       Date:  1988-08-15       Impact factor: 5.157

5.  Prohead and DNA-gp3-dependent ATPase activity of the DNA packaging protein gp16 of bacteriophage phi 29.

Authors:  P Guo; C Peterson; D Anderson
Journal:  J Mol Biol       Date:  1987-09-20       Impact factor: 5.469

6.  Nucleotide sequence and transcript organization of a region of the vaccinia virus genome which encodes a constitutively expressed gene required for DNA replication.

Authors:  N A Roseman; D E Hruby
Journal:  J Virol       Date:  1987-05       Impact factor: 5.103

7.  Conditional lethal mutants of the small filamentous coliphage M13. I. Isolation, complementation, cell killing, time of cistron action.

Authors:  D Pratt; H Tzagoloff; W S Erdahl
Journal:  Virology       Date:  1966-11       Impact factor: 3.616

8.  Vaccinia virus encodes four putative DNA and/or RNA helicases distantly related to each other.

Authors:  E V Koonin; T G Senkevich
Journal:  J Gen Virol       Date:  1992-04       Impact factor: 3.891

Review 9.  Filamentous phage assembly.

Authors:  M Russel
Journal:  Mol Microbiol       Date:  1991-07       Impact factor: 3.501

10.  Genetic analysis of the filamentous bacteriophage packaging signal and of the proteins that interact with it.

Authors:  M Russel; P Model
Journal:  J Virol       Date:  1989-08       Impact factor: 5.103

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  22 in total

1.  Common origin of four diverse families of large eukaryotic DNA viruses.

Authors:  L M Iyer; L Aravind; E V Koonin
Journal:  J Virol       Date:  2001-12       Impact factor: 5.103

2.  Genetic analysis of the vaccinia virus I6 telomere-binding protein uncovers a key role in genome encapsidation.

Authors:  Olivera Grubisha; Paula Traktman
Journal:  J Virol       Date:  2003-10       Impact factor: 5.103

3.  The effect of N- or C-terminal alterations of the connector of bacteriophage phi29 DNA packaging motor on procapsid assembly, pRNA binding, and DNA packaging.

Authors:  Ying Cai; Feng Xiao; Peixuan Guo
Journal:  Nanomedicine       Date:  2008-01-16       Impact factor: 5.307

4.  Adenovirus IVa2 protein binds ATP.

Authors:  Philomena Ostapchuk; Patrick Hearing
Journal:  J Virol       Date:  2008-07-30       Impact factor: 5.103

Review 5.  Poxvirus DNA replication.

Authors:  Bernard Moss
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-09-01       Impact factor: 10.005

6.  Characterization of Empty adenovirus particles assembled in the absence of a functional adenovirus IVa2 protein.

Authors:  Philomena Ostapchuk; Matthew Almond; Patrick Hearing
Journal:  J Virol       Date:  2011-03-30       Impact factor: 5.103

7.  Sequential action of six virus-encoded DNA-packaging RNAs during phage phi29 genomic DNA translocation.

Authors:  C Chen; P Guo
Journal:  J Virol       Date:  1997-05       Impact factor: 5.103

8.  Real-time sensing and discrimination of single chemicals using the channel of phi29 DNA packaging nanomotor.

Authors:  Farzin Haque; Jennifer Lunn; Huaming Fang; David Smithrud; Peixuan Guo
Journal:  ACS Nano       Date:  2012-04-09       Impact factor: 15.881

9.  DNA packaging mutant: repression of the vaccinia virus A32 gene results in noninfectious, DNA-deficient, spherical, enveloped particles.

Authors:  M C Cassetti; M Merchlinsky; E J Wolffe; A S Weisberg; B Moss
Journal:  J Virol       Date:  1998-07       Impact factor: 5.103

10.  Comparative genomics of the FtsK-HerA superfamily of pumping ATPases: implications for the origins of chromosome segregation, cell division and viral capsid packaging.

Authors:  Lakshminarayan M Iyer; Kira S Makarova; Eugene V Koonin; L Aravind
Journal:  Nucleic Acids Res       Date:  2004-10-05       Impact factor: 16.971

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