Literature DB >> 8455632

Contribution of sequences downstream of the TATA element to a protein-DNA complex containing the TATA-binding protein.

B A Purnell1, D S Gilmour.   

Abstract

A TATA complex that forms on the hsp70 promoter has been found to depend on sequence-specific interactions that occur at the transcription start and regions further downstream. The complex was detected with a gel shift assay and further characterized with interference assays. Antibodies reveal that the TATA-binding protein is in the complex. Interference assays localize specific contacts in the TATA element, the start site, and in a region approximately 25 bp downstream of the start site that contribute to either the assembly or the maintenance of the complex. Contact at the TATA element is made in the minor groove, as has been reported for the recombinant TATA-binding protein. Mutation in the TATA element or the start site of hsp70 causes complex formation to be more strongly dependent on contacts in the +25 region than in the normal core promoter. Examination of the hsp26 and histone H4 genes indicates that similar contacts contribute to the TATA complexes that form on these promoters. The results suggest that specific contacts downstream of the TATA element could play a key role in establishing the transcriptional potential of a gene by contributing to the interaction of the TATA-binding protein.

Entities:  

Mesh:

Substances:

Year:  1993        PMID: 8455632      PMCID: PMC359594          DOI: 10.1128/mcb.13.4.2593-2603.1993

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  52 in total

1.  YY1 is an initiator sequence-binding protein that directs and activates transcription in vitro.

Authors:  E Seto; Y Shi; T Shenk
Journal:  Nature       Date:  1991-11-21       Impact factor: 49.962

2.  Hydroxyl radical "footprinting": high-resolution information about DNA-protein contacts and application to lambda repressor and Cro protein.

Authors:  T D Tullius; B A Dombroski
Journal:  Proc Natl Acad Sci U S A       Date:  1986-08       Impact factor: 11.205

3.  An exonuclease protection assay reveals heat-shock element and TATA box DNA-binding proteins in crude nuclear extracts.

Authors:  C Wu
Journal:  Nature       Date:  1985 Sep 5-11       Impact factor: 49.962

4.  In vivo interactions of RNA polymerase II with genes of Drosophila melanogaster.

Authors:  D S Gilmour; J T Lis
Journal:  Mol Cell Biol       Date:  1985-08       Impact factor: 4.272

5.  Translational and transcriptional control elements in the untranslated leader of the heat-shock gene hsp22.

Authors:  D Hultmark; R Klemenz; W J Gehring
Journal:  Cell       Date:  1986-02-14       Impact factor: 41.582

6.  A Drosophila RNA polymerase II transcription factor contains a promoter-region-specific DNA-binding activity.

Authors:  C S Parker; J Topol
Journal:  Cell       Date:  1984-02       Impact factor: 41.582

7.  The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.

Authors:  C Wu
Journal:  Nature       Date:  1980-08-28       Impact factor: 49.962

8.  A Drosophila RNA polymerase II transcription factor binds to the regulatory site of an hsp 70 gene.

Authors:  C S Parker; J Topol
Journal:  Cell       Date:  1984-05       Impact factor: 41.582

9.  Interaction of a gene-specific transcription factor with the adenovirus major late promoter upstream of the TATA box region.

Authors:  M Sawadogo; R G Roeder
Journal:  Cell       Date:  1985-11       Impact factor: 41.582

10.  Cleavage of DNA with methidiumpropyl-EDTA-iron(II): reaction conditions and product analyses.

Authors:  R P Hertzberg; P B Dervan
Journal:  Biochemistry       Date:  1984-08-14       Impact factor: 3.162

View more
  31 in total

1.  A novel transcriptional initiator activity of the GABP factor binding ets sequence repeat from the murine cytochrome c oxidase Vb gene.

Authors:  C Sucharov; A Basu; R S Carter; N G Avadhani
Journal:  Gene Expr       Date:  1995

2.  YY1 transcriptional initiator: protein interactions and association with a DNA site containing unpaired strands.

Authors:  A Usheva; T Shenk
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

Review 3.  Considerations of transcriptional control mechanisms: do TFIID-core promoter complexes recapitulate nucleosome-like functions?

Authors:  A Hoffmann; T Oelgeschläger; R G Roeder
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-19       Impact factor: 11.205

4.  The neuron-restrictive silencer element: a dual enhancer/silencer crucial for patterned expression of a nicotinic receptor gene in the brain.

Authors:  A Bessis; N Champtiaux; L Chatelin; J P Changeux
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-27       Impact factor: 11.205

5.  Structure, expression, and functional analysis of the gene coding for calmodulin in the chytridiomycete Blastocladiella emersonii.

Authors:  R C Simão; S L Gomes
Journal:  J Bacteriol       Date:  2001-04       Impact factor: 3.490

6.  Analysis of core promoter sequences located downstream from the TATA element in the hsp70 promoter from Drosophila melanogaster.

Authors:  C H Wu; L Madabusi; H Nishioka; P Emanuel; M Sypes; I Arkhipova; D S Gilmour
Journal:  Mol Cell Biol       Date:  2001-03       Impact factor: 4.272

7.  Experimentally determined weight matrix definitions of the initiator and TBP binding site elements of promoters.

Authors:  R J Kraus; E E Murray; S R Wiley; N M Zink; K Loritz; G W Gelembiuk; J E Mertz
Journal:  Nucleic Acids Res       Date:  1996-04-15       Impact factor: 16.971

8.  DNA sequence requirements for transcriptional initiator activity in mammalian cells.

Authors:  R Javahery; A Khachi; K Lo; B Zenzie-Gregory; S T Smale
Journal:  Mol Cell Biol       Date:  1994-01       Impact factor: 4.272

9.  Activation of a dual adenovirus promoter containing nonconsensus TATA motifs in Schizosaccharomyces pombe: role of TATA sequences in the efficiency of transcription.

Authors:  S Swaminathan; P Malhotra; C F Manohar; R Dhar; B Thimmapaya
Journal:  Nucleic Acids Res       Date:  1993-06-11       Impact factor: 16.971

10.  The downstream core promoter element, DPE, is conserved from Drosophila to humans and is recognized by TAFII60 of Drosophila.

Authors:  T W Burke; J T Kadonaga
Journal:  Genes Dev       Date:  1997-11-15       Impact factor: 11.361

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.