Literature DB >> 8454623

A common ATP requirement for open complex formation and transcription at promoters containing initiator or TATA elements.

Y Jiang1, S T Smale, J D Gralla.   

Abstract

The involvement of ATP during transcription initiation from three basic types of RNA polymerase II promoters was investigated. Hydrolysis of the beta-gamma bond of ATP was found to be required for transcription at TATA, initiator, and initiator + TATA promoters. For all three promoters, ATP is required to melt the transcription start site region during formation of a functional open transcription complex. The use of ATP to open the DNA strands occurs rapidly. The resulting open complex is transient, since the start site re-closes rapidly upon initiation. The requirements for efficient open complex formation were similar to those for transcription in that both upstream elements and a basal element, either TATA or initiator, were necessary. The results further suggest that TATA-dependent and initiator-dependent preinitiation complex assembly pathways converge, prior to a step in which the strands are rapidly opened in the presence of ATP, to form analogous open complexes.

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Year:  1993        PMID: 8454623

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  14 in total

1.  ATP-mediated activation of RNA polymerase II transcription complexes.

Authors:  S J Kopytek; D O Peterson
Journal:  Gene Expr       Date:  1998

2.  Multiple ATP-dependent steps in RNA polymerase II promoter melting and initiation.

Authors:  M Yan; J D Gralla
Journal:  EMBO J       Date:  1997-12-15       Impact factor: 11.598

3.  A three-step pathway of transcription initiation leading to promoter clearance at an activation RNA polymerase II promoter.

Authors:  Y Jiang; M Yan; J D Gralla
Journal:  Mol Cell Biol       Date:  1996-04       Impact factor: 4.272

4.  A proposed architecture for the central domain of the bacterial enhancer-binding proteins based on secondary structure prediction and fold recognition.

Authors:  J Osuna; X Soberón; E Morett
Journal:  Protein Sci       Date:  1997-03       Impact factor: 6.725

5.  Experimentally determined weight matrix definitions of the initiator and TBP binding site elements of promoters.

Authors:  R J Kraus; E E Murray; S R Wiley; N M Zink; K Loritz; G W Gelembiuk; J E Mertz
Journal:  Nucleic Acids Res       Date:  1996-04-15       Impact factor: 16.971

6.  Core promoter specificities of the Sp1 and VP16 transcriptional activation domains.

Authors:  K H Emami; W W Navarre; S T Smale
Journal:  Mol Cell Biol       Date:  1995-11       Impact factor: 4.272

7.  Properties of initiator-associated transcription mediated by GAL4-VP16.

Authors:  C Chang; J D Gralla
Journal:  Mol Cell Biol       Date:  1993-12       Impact factor: 4.272

8.  Analysis of the role of TFIIE in basal transcription and TFIIH-mediated carboxy-terminal domain phosphorylation through structure-function studies of TFIIE-alpha.

Authors:  Y Ohkuma; S Hashimoto; C K Wang; M Horikoshi; R G Roeder
Journal:  Mol Cell Biol       Date:  1995-09       Impact factor: 4.272

9.  RNA polymerase II phosphorylation: uncoupling from GAL4-VP16 directed open complex formation and transcription in a reconstituted system.

Authors:  Y Jiang; J D Gralla
Journal:  Nucleic Acids Res       Date:  1994-11-25       Impact factor: 16.971

10.  Uncoupling of initiation and reinitiation rates during HeLa RNA polymerase II transcription in vitro.

Authors:  Y Jiang; J D Gralla
Journal:  Mol Cell Biol       Date:  1993-08       Impact factor: 4.272

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