Literature DB >> 8443596

Characterization and 2D NMR study of the stable [9-21, 15-27] 2 disulfide intermediate in the folding of the 3 disulfide trypsin inhibitor EETI II.

D Le-Nguyen1, A Heitz, L Chiche, M el Hajji, B Castro.   

Abstract

The three disulfide Ecballium elaterium trypsin inhibitor II (EETI II) reduction with dithiothreitol (DTT) and reoxidation of the fully reduced derivative have been examined. A common stable intermediate has been observed for both processes. Isolation and sequencing of carboxymethylated material showed that the intermediate lacks the [2-19] bridge. The NMR study showed a very strong structural conservation as compared to the native EETI II, suggesting that the bridges are the [9-21] and [15-27] native ones. The differences occurred in sections 2-7 (containing the free cysteine 2 and the Arg 4-Ile 5 active site) and 19-21 (containing the second free cysteine). Distance geometry calculations and restrained molecular dynamics refinements were also in favor of a [9-21, 15-27] arrangement and resulted in a well-conserved (7-28) segment.

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Year:  1993        PMID: 8443596      PMCID: PMC2142350          DOI: 10.1002/pro.5560020205

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  19 in total

1.  Protease inhibitors from Ecballium elaterium seeds.

Authors:  A Favel; H Mattras; M A Coletti-Previero; R Zwilling; E A Robinson; B Castro
Journal:  Int J Pept Protein Res       Date:  1989-03

2.  Atomic solvation parameters applied to molecular dynamics of proteins in solution.

Authors:  L Wesson; D Eisenberg
Journal:  Protein Sci       Date:  1992-02       Impact factor: 6.725

3.  The refined 2.0 A X-ray crystal structure of the complex formed between bovine beta-trypsin and CMTI-I, a trypsin inhibitor from squash seeds (Cucurbita maxima). Topological similarity of the squash seed inhibitors with the carboxypeptidase A inhibitor from potatoes.

Authors:  W Bode; H J Greyling; R Huber; J Otlewski; T Wilusz
Journal:  FEBS Lett       Date:  1989-01-02       Impact factor: 4.124

4.  Synthesis and secondary-structure determination of omega-conotoxin GVIA: a 27-peptide with three intramolecular disulfide bonds.

Authors:  Y Nishiuchi; K Kumagaye; Y Noda; T X Watanabe; S Sakakibara
Journal:  Biopolymers       Date:  1986       Impact factor: 2.505

Review 5.  Experimental studies of protein folding and unfolding.

Authors:  T E Creighton
Journal:  Prog Biophys Mol Biol       Date:  1978       Impact factor: 3.667

6.  Pseudo-structures for the 20 common amino acids for use in studies of protein conformations by measurements of intramolecular proton-proton distance constraints with nuclear magnetic resonance.

Authors:  K Wüthrich; M Billeter; W Braun
Journal:  J Mol Biol       Date:  1983-10-05       Impact factor: 5.469

7.  Isolation and partial amino acid sequence of the trypsin inhibitor from the seeds of Cucurbita maxima.

Authors:  A Polanowski; T Wilusz; B Nienartowicz; E Cieślar; A Słomińska; K Nowak
Journal:  Acta Biochim Pol       Date:  1980       Impact factor: 2.149

8.  Refined crystal structure of the potato inhibitor complex of carboxypeptidase A at 2.5 A resolution.

Authors:  D C Rees; W N Lipscomb
Journal:  J Mol Biol       Date:  1982-09-25       Impact factor: 5.469

9.  1H 2D NMR and distance geometry study of the folding of Ecballium elaterium trypsin inhibitor, a member of the squash inhibitors family.

Authors:  A Heitz; L Chiche; D Le-Nguyen; B Castro
Journal:  Biochemistry       Date:  1989-03-21       Impact factor: 3.162

10.  Structure of the toxic domain of the Escherichia coli heat-stable enterotoxin ST I.

Authors:  J Gariépy; A Lane; F Frayman; D Wilbur; W Robien; G K Schoolnik; O Jardetzky
Journal:  Biochemistry       Date:  1986-12-02       Impact factor: 3.162

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  12 in total

1.  Unique scorpion toxin with a putative ancestral fold provides insight into evolution of the inhibitor cystine knot motif.

Authors:  Jennifer J Smith; Justine M Hill; Michelle J Little; Graham M Nicholson; Glenn F King; Paul F Alewood
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-13       Impact factor: 11.205

2.  Heterochiral Knottin Protein: Folding and Solution Structure.

Authors:  Surin K Mong; Frank V Cochran; Hongtao Yu; Zachary Graziano; Yu-Shan Lin; Jennifer R Cochran; Bradley L Pentelute
Journal:  Biochemistry       Date:  2017-10-17       Impact factor: 3.162

3.  A common structural motif incorporating a cystine knot and a triple-stranded beta-sheet in toxic and inhibitory polypeptides.

Authors:  P K Pallaghy; K J Nielsen; D J Craik; R S Norton
Journal:  Protein Sci       Date:  1994-10       Impact factor: 6.725

4.  Role of the 6-20 disulfide bridge in the structure and activity of epidermal growth factor.

Authors:  K J Barnham; A M Torres; D Alewood; P F Alewood; T Domagala; E C Nice; R S Norton
Journal:  Protein Sci       Date:  1998-08       Impact factor: 6.725

5.  Conservative mutation Met8 --> Leu affects the folding process and structural stability of squash trypsin inhibitor CMTI-I.

Authors:  I Zhukov; L Jaroszewski; A Bierzyński
Journal:  Protein Sci       Date:  2000-02       Impact factor: 6.725

6.  An 1H NMR determination of the three-dimensional structures of mirror-image forms of a Leu-5 variant of the trypsin inhibitor from Ecballium elaterium (EETI-II).

Authors:  K J Nielsen; D Alewood; J Andrews; S B Kent; D J Craik
Journal:  Protein Sci       Date:  1994-02       Impact factor: 6.725

7.  Novel inhibitor cystine knot peptides from Momordica charantia.

Authors:  Wen-Jun He; Lai Yue Chan; Richard J Clark; Jun Tang; Guang-Zhi Zeng; Octavio L Franco; Cinzia Cantacessi; David J Craik; Norelle L Daly; Ning-Hua Tan
Journal:  PLoS One       Date:  2013-10-08       Impact factor: 3.240

8.  Knottin cyclization: impact on structure and dynamics.

Authors:  Annie Heitz; Olga Avrutina; Dung Le-Nguyen; Ulf Diederichsen; Jean-François Hernandez; Jérôme Gracy; Harald Kolmar; Laurent Chiche
Journal:  BMC Struct Biol       Date:  2008-12-12

9.  Interrogating and predicting tolerated sequence diversity in protein folds: application to E. elaterium trypsin inhibitor-II cystine-knot miniprotein.

Authors:  Jennifer L Lahti; Adam P Silverman; Jennifer R Cochran
Journal:  PLoS Comput Biol       Date:  2009-09-04       Impact factor: 4.475

10.  Combinatorial optimization of cystine-knot peptides towards high-affinity inhibitors of human matriptase-1.

Authors:  Bernhard Glotzbach; Michael Reinwarth; Niklas Weber; Sebastian Fabritz; Michael Tomaszowski; Heiko Fittler; Andreas Christmann; Olga Avrutina; Harald Kolmar
Journal:  PLoS One       Date:  2013-10-11       Impact factor: 3.240

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