Literature DB >> 8443171

FTIR difference spectroscopy of the bacteriorhodopsin mutant Tyr-185-->Phe: detection of a stable O-like species and characterization of its photocycle at low temperature.

Y He1, M P Krebs, W B Fischer, H G Khorana, K J Rothschild.   

Abstract

Fourier transform infrared difference spectroscopy has been used to study the photocycle of the mutant Tyr-185-->Phe expressed in native Halobacterium halobium and isolated as intact purple membrane fragments. We find several changes in the low-temperature bR-->K, bR-->L, and bR-->M FTIR difference spectra of Y185F relative to wild-type bR which are not directly related to the absorption bands associated with Tyr-185. We show that these features arise from the photoreaction of a stable red-shifted species (OY185F) with a vibrational spectrum similar to the O intermediate. By using photoselection and FTIR spectroscopy, we have been able to characterize the photoproducts of this OY185F species. A K-like photoproduct is formed at 80 K which has a 13-cis structure. However, it differs from K630, exhibiting an intense band at 990 cm-1 most likely due to a hydrogen-out-of-plane vibrational mode of the chromophore. At 170 and 250 K, photoexcitation of OY185F produces an intermediate with vibrational features similar to the N intermediate in the wild-type bR photocycle. However, no evidence for an M-like intermediate is found. Although Asp-96 undergoes a change in its environment/protonation state during the OY185F photocycle, no protonation changes involving Asp-85 and Asp-212 were detected. These results provide strong evidence that light adaptation of Y185F produces two species similar to bR570 and the O intermediate. Differences in their respective photocycles can be explained on the basis of differences in the protonation states of the residues Asp-85 and Asp-212 which are ionized in bR570 and undergo net protonation upon OY185F formation.

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Year:  1993        PMID: 8443171     DOI: 10.1021/bi00060a021

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  6 in total

1.  Static and time-resolved step-scan Fourier transform infrared investigations of the photoreaction of halorhodopsin from Natronobacterium pharaonis: consequences for models of the anion translocation mechanism.

Authors:  C Hackmann; J Guijarro; I Chizhov; M Engelhard; C Rödig; F Siebert
Journal:  Biophys J       Date:  2001-07       Impact factor: 4.033

2.  Characterization and photochemistry of 13-desmethyl bacteriorhodopsin.

Authors:  Nathan B Gillespie; Lei Ren; Lavoisier Ramos; Heather Daniell; Deborah Dews; Karissa A Utzat; Jeffrey A Stuart; Charles H Buck; Robert R Birge
Journal:  J Phys Chem B       Date:  2005-08-25       Impact factor: 2.991

3.  Perturbed interaction between residues 85 and 204 in Tyr-185-->Phe and Asp-85-->Glu bacteriorhodopsins.

Authors:  H T Richter; R Needleman; J K Lanyi
Journal:  Biophys J       Date:  1996-12       Impact factor: 4.033

4.  Evidence that aspartate-85 has a higher pK(a) in all-trans than in 13-cisbacteriorhodopsin.

Authors:  S P Balashov; E S Imasheva; R Govindjee; M Sheves; T G Ebrey
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

5.  Raman spectroscopy of a near infrared absorbing proteorhodopsin: Similarities to the bacteriorhodopsin O photointermediate.

Authors:  Gaoxiang Mei; Natalia Mamaeva; Srividya Ganapathy; Peng Wang; Willem J DeGrip; Kenneth J Rothschild
Journal:  PLoS One       Date:  2018-12-26       Impact factor: 3.240

6.  Photoreaction Pathways of Bacteriorhodopsin and Its D96N Mutant as Revealed by in Situ Photoirradiation Solid-State NMR.

Authors:  Arisu Shigeta; Yuto Otani; Ryota Miyasa; Yoshiteru Makino; Izuru Kawamura; Takashi Okitsu; Akimori Wada; Akira Naito
Journal:  Membranes (Basel)       Date:  2022-02-28
  6 in total

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