Literature DB >> 8432840

Fast DNA isolation from Histoplasma capsulatum: methodology for arbitrary primer polymerase chain reaction-based epidemiological and clinical studies.

J P Woods1, D Kersulyte, W E Goldman, D E Berg.   

Abstract

The arbitrary primer polymerase chain reaction (also called random amplified polymorphic DNA, or RAPD) is a DNA fingerprinting method that provides an efficient, sensitive way of discriminating between independent isolates of Histoplasma capsulatum, but its widespread application has been hampered by the arduous 2-day procedure traditionally used to extract DNA from H. capsulatum. We present here a quick (approximately 2-h) extraction method and show that the resultant DNA is suitable for sensitive and reproducible identification of individual strains of this pathogenic fungus.

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Year:  1993        PMID: 8432840      PMCID: PMC262791          DOI: 10.1128/jcm.31.2.463-464.1993

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  12 in total

1.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

Review 2.  Systemic fungal infections: diagnosis and treatment. I. Histoplasmosis.

Authors:  L J Wheat
Journal:  Infect Dis Clin North Am       Date:  1988-12       Impact factor: 5.982

3.  Infection of P388D1 macrophages and respiratory epithelial cells by Histoplasma capsulatum: selection of avirulent variants and their potential role in persistent histoplasmosis.

Authors:  L G Eissenberg; J L West; J P Woods; W E Goldman
Journal:  Infect Immun       Date:  1991-05       Impact factor: 3.441

4.  Classification of Histoplasma capsulatum isolates by restriction fragment polymorphisms.

Authors:  R D Vincent; R Goewert; W E Goldman; G S Kobayashi; A M Lambowitz; G Medoff
Journal:  J Bacteriol       Date:  1986-03       Impact factor: 3.490

5.  Fingerprinting genomes using PCR with arbitrary primers.

Authors:  J Welsh; M McClelland
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

6.  Typing of Histoplasma capsulatum by restriction fragment length polymorphisms in a nuclear gene.

Authors:  E J Keath; G S Kobayashi; G Medoff
Journal:  J Clin Microbiol       Date:  1992-08       Impact factor: 5.948

7.  Quantitative plating of Histoplasma capsulatum without addition of conditioned medium or siderophores.

Authors:  P L Worsham; W E Goldman
Journal:  J Med Vet Mycol       Date:  1988-06

8.  In vivo generation of linear plasmids with addition of telomeric sequences by Histoplasma capsulatum.

Authors:  J P Woods; W E Goldman
Journal:  Mol Microbiol       Date:  1992-12       Impact factor: 3.501

9.  Temperature-sensitive variants of Histoplasma capsulatum isolated from patients with acquired immunodeficiency syndrome.

Authors:  E D Spitzer; E J Keath; S J Travis; A A Painter; G S Kobayashi; G Medoff
Journal:  J Infect Dis       Date:  1990-07       Impact factor: 5.226

Review 10.  Histoplasma variation and adaptive strategies for parasitism: new perspectives on histoplasmosis.

Authors:  L G Eissenberg; W E Goldman
Journal:  Clin Microbiol Rev       Date:  1991-10       Impact factor: 26.132

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  22 in total

Review 1.  Developments in fungal taxonomy.

Authors:  J Guarro; A M Stchigel
Journal:  Clin Microbiol Rev       Date:  1999-07       Impact factor: 26.132

Review 2.  The ins and outs of DNA fingerprinting the infectious fungi.

Authors:  D R Soll
Journal:  Clin Microbiol Rev       Date:  2000-04       Impact factor: 26.132

3.  Comparison of different DNA-based methods for molecular typing of Histoplasma capsulatum.

Authors:  Mauro de Medeiros Muniz; Patrícia Morais E Silva Tavares; Wieland Meyer; Joshua Daniel Nosanchuk; Rosely Maria Zancope-Oliveira
Journal:  Appl Environ Microbiol       Date:  2010-05-07       Impact factor: 4.792

4.  Rapid identification of Sporothrix species by T3B fingerprinting.

Authors:  Manoel Marques Evangelista de Oliveira; Paula Sampaio; Rodrigo Almeida-Paes; Célia Pais; Maria Clara Gutierrez-Galhardo; Rosely Maria Zancope-Oliveira
Journal:  J Clin Microbiol       Date:  2012-03-07       Impact factor: 5.948

5.  History of medical mycology in the united states.

Authors:  A Espinel-Ingroff
Journal:  Clin Microbiol Rev       Date:  1996-04       Impact factor: 26.132

6.  Agrobacterium tumefaciens integrates transfer DNA into single chromosomal sites of dimorphic fungi and yields homokaryotic progeny from multinucleate yeast.

Authors:  Thomas D Sullivan; Peggy J Rooney; Bruce S Klein
Journal:  Eukaryot Cell       Date:  2002-12

7.  Randomly amplified polymorphic DNA as a valuable tool for epidemiological studies of Paracoccidioides brasiliensis.

Authors:  Rosane Christine Hahn; Andréa Mara Macedo; Cor Jesus Fernandes Fontes; Renata Dias Batista; Niriana Lara Santos; Júnia Soares Hamdan
Journal:  J Clin Microbiol       Date:  2003-07       Impact factor: 5.948

8.  Geographic discrimination of Paracoccidioides brasiliensis strains by randomly amplified polymorphic DNA analysis.

Authors:  A M Calcagno; G Niño-Vega; F San-Blas; G San-Blas
Journal:  J Clin Microbiol       Date:  1998-06       Impact factor: 5.948

9.  Molecular characterization of Histoplasma capsulatum isolated from an outbreak in treasure hunters Histoplasma capsulatum in treasure hunters.

Authors:  Bertha Muñoz; María A Martínez; Gabriel Palma; Amado Ramírez; María G Frías; María R Reyes; María L Taylor; Anjarath L Higuera; Alexander Corcho; María E Manjarrez
Journal:  BMC Infect Dis       Date:  2010-09-08       Impact factor: 3.090

10.  Genetic diversity in clinical isolates of the dimorphic fungus Blastomyces dermatitidis detected by a PCR-based random amplified polymorphic DNA assay.

Authors:  K E Yates-Siilata; D M Sander; E J Keath
Journal:  J Clin Microbiol       Date:  1995-08       Impact factor: 5.948

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