Literature DB >> 8416803

The NMR determination of the IIA(mtl) binding site on HPr of the Escherichia coli phosphoenol pyruvate-dependent phosphotransferase system.

N A van Nuland1, G J Kroon, K Dijkstra, G K Wolters, R M Scheek, G T Robillard.   

Abstract

The region of the surface of the histidine-containing protein (HPr) which interacts with the A domain of the mannitol-specific Enzyme II (II(Amt1)) has been mapped by titrating the A-domain into a solution of 15N-labeled HPr and monitoring the effects on the amide proton and nitrogen chemical shifts via heteronuclear single quantum correlation spectroscopy (HSQC). Fourteen of the eighty-five HPr amino acid residues show large changes in either the 15N or 1H chemical shifts or both as a result of the presence of II(Amt1) while a further seventeen residues experience lesser shifts. Most of the residues involved are surface residues accounting for approximately 25% of the surface of HPr. Phosphorylation of HPr with catalytic amounts of Enzyme I (EI), in the absence of II(Amt1) resulted in chemical shift changes in a sub-set of the above residues; these were located more in the vicinity of the active site phospho-histidine. Phosphorylation of the HPr/II(Amt1) complex resulted in a HSQC spectrum which was indistinguishable from the P-HPr spectrum in the absence of II(Amt1) indicating that, as expected, the complex P-HPr/P-II(Amt1) does not exist even at the high concentrations necessary for NMR.

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Year:  1993        PMID: 8416803     DOI: 10.1016/0014-5793(93)81122-g

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  10 in total

1.  Automated evaluation of chemical shift perturbation spectra: New approaches to quantitative analysis of receptor-ligand interaction NMR spectra.

Authors:  Chen Peng; Stephen W Unger; Fabian V Filipp; Michael Sattler; Sándor Szalma
Journal:  J Biomol NMR       Date:  2004-08       Impact factor: 2.835

Review 2.  How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria.

Authors:  Josef Deutscher; Christof Francke; Pieter W Postma
Journal:  Microbiol Mol Biol Rev       Date:  2006-12       Impact factor: 11.056

3.  Structure from NMR and molecular dynamics: Distance restraining inhibits motion in the essential subspace.

Authors:  R M Scheek; N A van Nuland; B L de Groot; A Amadei
Journal:  J Biomol NMR       Date:  1995-07       Impact factor: 2.835

4.  Antibody variable region binding by Staphylococcal protein A: thermodynamic analysis and location of the Fv binding site on E-domain.

Authors:  M A Starovasnik; M P O'Connell; W J Fairbrother; R F Kelley
Journal:  Protein Sci       Date:  1999-07       Impact factor: 6.725

Review 5.  Examining weak protein-protein interactions in start codon recognition via NMR spectroscopy.

Authors:  Rafael E Luna; Sabine R Akabayov; Joshua J Ziarek; Gerhard Wagner
Journal:  FEBS J       Date:  2014-01-02       Impact factor: 5.542

6.  Demonstration of protein-protein interaction specificity by NMR chemical shift mapping.

Authors:  P Rajagopal; E B Waygood; J Reizer; M H Saier; R E Klevit
Journal:  Protein Sci       Date:  1997-12       Impact factor: 6.725

7.  Distinct specificity in the recognition of phosphoinositides by the pleckstrin homology domains of dynamin and Bruton's tyrosine kinase.

Authors:  K Salim; M J Bottomley; E Querfurth; M J Zvelebil; I Gout; R Scaife; R L Margolis; R Gigg; C I Smith; P C Driscoll; M D Waterfield; G Panayotou
Journal:  EMBO J       Date:  1996-11-15       Impact factor: 11.598

8.  NMR characterization of interleukin-2 in complexes with the IL-2Ralpha receptor component, and with low molecular weight compounds that inhibit the IL-2/IL-Ralpha interaction.

Authors:  S Donald Emerson; Robert Palermo; Chao-Min Liu; Jefferson W Tilley; Li Chen; Waleed Danho; Vincent S Madison; David N Greeley; Grace Ju; David C Fry
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

9.  Chemical shift as a probe of molecular interfaces: NMR studies of DNA binding by the three amino-terminal zinc finger domains from transcription factor IIIA.

Authors:  M P Foster; D S Wuttke; K R Clemens; W Jahnke; I Radhakrishnan; L Tennant; M Reymond; J Chung; P E Wright
Journal:  J Biomol NMR       Date:  1998-07       Impact factor: 2.835

10.  Backbone assignments and secondary structure of the Escherichia coli enzyme-II mannitol A domain determined by heteronuclear three-dimensional NMR spectroscopy.

Authors:  G J Kroon; J Grötzinger; K Dijkstra; R M Scheek; G T Robillard
Journal:  Protein Sci       Date:  1993-08       Impact factor: 6.725

  10 in total

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