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Literature DB >> 8413198

Analysis of a replication initiation sequence from the adenosine deaminase region of the mouse genome.

V J Virta-Pearlman¹, P H Gunaratne, A C Chinault.

Abstract

A 4-kb HindIII fragment that supported the efficient autonomous replication of plasmid vector pDY-, a replication-defective construct based on Epstein-Barr virus sequences, in human K562 cells was rescued from amplified double-minute chromosomes containing the murine adenosine deaminase locus. Polymerase chain reaction assays of size-fractionated nascent strands demonstrated that replication initiation occurred within the same 1- to 2-kb region of this fragment in autonomously replicating plasmids containing the sequence in either orientation, in double-minute chromosomes, and in the single-copy locus at its normal chromosomal location. The complete sequence of this fragment was determined; it contains a 248-bp polypurine tract and consensus binding site sequences for several putative transcription and replication factors.

Entities: Chemical Gene Species

Mesh：

Substances：
DNA
Adenosine Deaminase

Year: 1993 PMID： 8413198 PMCID： PMC364638 DOI： 10.1128/mcb.13.10.5931-5942.1993

Source DB: PubMed Journal: Mol Cell Biol ISSN： 0270-7306 Impact factor: 4.272

76 in total

1. RIP60, a mammalian origin-binding protein, enhances DNA bending near the dihydrofolate reductase origin of replication.

Authors: M S Caddle; L Dailey; N H Heintz
Journal: Mol Cell Biol Date: 1990-12 Impact factor: 4.272

2. Basic local alignment search tool.

Authors: S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal: J Mol Biol Date: 1990-10-05 Impact factor: 5.469

3. Distribution of CT-rich tracts is conserved in vertebrate chromosomes.

Authors: A K Wong; H A Yee; J H van de Sande; J B Rattner
Journal: Chromosoma Date: 1990-09 Impact factor: 4.316

4. Autonomous DNA replication in human cells is affected by the size and the source of the DNA.

Authors: S S Heinzel; P J Krysan; C T Tran; M P Calos
Journal: Mol Cell Biol Date: 1991-04 Impact factor: 4.272

5. Mapping an origin of DNA replication at a single-copy locus in exponentially proliferating mammalian cells.

Authors: L T Vassilev; W C Burhans; M L DePamphilis
Journal: Mol Cell Biol Date: 1990-09 Impact factor: 4.272

6. Replication initiates at multiple locations on an autonomously replicating plasmid in human cells.

Authors: P J Krysan; M P Calos
Journal: Mol Cell Biol Date: 1991-03 Impact factor: 4.272

7. Replication initiates in a broad zone in the amplified CHO dihydrofolate reductase domain.

Authors: J P Vaughn; P A Dijkwel; J L Hamlin
Journal: Cell Date: 1990-06-15 Impact factor: 41.582

8. Purification of RIP60 and RIP100, mammalian proteins with origin-specific DNA-binding and ATP-dependent DNA helicase activities.

Authors: L Dailey; M S Caddle; N Heintz; N H Heintz
Journal: Mol Cell Biol Date: 1990-12 Impact factor: 4.272

9. Formation of DNA triplexes accounts for arrests of DNA synthesis at d(TC)n and d(GA)n tracts.

Authors: N Baran; A Lapidot; H Manor
Journal: Proc Natl Acad Sci U S A Date: 1991-01-15 Impact factor: 11.205

10. The DNA binding domain (POU domain) of transcription factor oct-1 suffices for stimulation of DNA replication.

Authors: C P Verrijzer; A J Kal; P C Van der Vliet
Journal: EMBO J Date: 1990-06 Impact factor: 11.598

19 in total

1. Multiple sites of replication initiation in the human beta-globin gene locus.

Authors: S Kamath; M Leffak
Journal: Nucleic Acids Res Date: 2001-02-01 Impact factor: 16.971

2. Replication initiation patterns in the beta-globin loci of totipotent and differentiated murine cells: evidence for multiple initiation regions.

Authors: Mirit I Aladjem; Luo Wei Rodewald; Chii Mai Lin; Sarah Bowman; Daniel M Cimbora; Linnea L Brody; Elliot M Epner; Mark Groudine; Geoffrey M Wahl
Journal: Mol Cell Biol Date: 2002-01 Impact factor: 4.272

10. High-resolution mapping of the origin of DNA replication in the hamster dihydrofolate reductase gene domain by competitive PCR.

Authors: C Pelizon; S Diviacco; A Falaschi; M Giacca
Journal: Mol Cell Biol Date: 1996-10 Impact factor: 4.272

Analysis of a replication initiation sequence from the adenosine deaminase region of the mouse genome.

1. RIP60, a mammalian origin-binding protein, enhances DNA bending near the dihydrofolate reductase origin of replication.

2. Basic local alignment search tool.

3. Distribution of CT-rich tracts is conserved in vertebrate chromosomes.

4. Autonomous DNA replication in human cells is affected by the size and the source of the DNA.

5. Mapping an origin of DNA replication at a single-copy locus in exponentially proliferating mammalian cells.

6. Replication initiates at multiple locations on an autonomously replicating plasmid in human cells.

7. Replication initiates in a broad zone in the amplified CHO dihydrofolate reductase domain.

8. Purification of RIP60 and RIP100, mammalian proteins with origin-specific DNA-binding and ATP-dependent DNA helicase activities.

9. Formation of DNA triplexes accounts for arrests of DNA synthesis at d(TC)n and d(GA)n tracts.

10. The DNA binding domain (POU domain) of transcription factor oct-1 suffices for stimulation of DNA replication.

1. Multiple sites of replication initiation in the human beta-globin gene locus.

2. Replication initiation patterns in the beta-globin loci of totipotent and differentiated murine cells: evidence for multiple initiation regions.

3. Why are we where we are? Understanding replication origins and initiation sites in eukaryotes using ChIP-approaches.

4. RNA-dependent DNA binding activity of the Pur factor, potentially involved in DNA replication and gene transcription.

5. Utilization of the same DNA replication origin by human cells of different derivation.

6. DNA replication initiates non-randomly at multiple sites near the c-myc gene in HeLa cells.

7. Identification of an origin of bidirectional DNA replication in the ubiquitously expressed mammalian CAD gene.

8. Site-specific initiation of DNA replication in Xenopus egg extract requires nuclear structure.

9. In vivo association of Ku with mammalian origins of DNA replication.

10. High-resolution mapping of the origin of DNA replication in the hamster dihydrofolate reductase gene domain by competitive PCR.