Literature DB >> 8389038

Characterisation of LTR sequences involved in the protoplast specific expression of the tobacco Tnt1 retrotransposon.

J M Casacuberta1, M A Grandbastien.   

Abstract

The tobacco Tnt1 retrotransposon is the only plant retrotransposon that has been shown to be transcriptionally active, and its transcription is strongly induced when preparing leaf-derived protoplasts. We have analysed in this paper the LTR sequences important for Tnt1 expression in tobacco protoplasts. We show that LTR sequences upstream of the TATA box are sufficient to confer protoplast-dependent induction to a heterologous promoter. We also show that this region contains two short activator elements, and that one of these sequences, BII, interacts with protoplast-specific nuclear factors.

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Year:  1993        PMID: 8389038      PMCID: PMC309469          DOI: 10.1093/nar/21.9.2087

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  28 in total

1.  Deletion analysis of a phytochrome-regulated monocot rbcS promoter in a transient assay system.

Authors:  S A Rolfe; E M Tobin
Journal:  Proc Natl Acad Sci U S A       Date:  1991-04-01       Impact factor: 11.205

2.  The upstream activation site of a Ty2 element of yeast is necessary but not sufficient to promote maximal transcription of the element.

Authors:  X B Liao; J J Clare; P J Farabaugh
Journal:  Proc Natl Acad Sci U S A       Date:  1987-12       Impact factor: 11.205

3.  Cell-type specific activity of two glucocorticoid responsive units of rat tyrosine aminotransferase gene is associated with multiple binding sites for C/EBP and a novel liver-specific nuclear factor.

Authors:  T Grange; J Roux; G Rigaud; R Pictet
Journal:  Nucleic Acids Res       Date:  1991-01-11       Impact factor: 16.971

4.  An evolutionarily conserved protein binding sequence upstream of a plant light-regulated gene.

Authors:  G Giuliano; E Pichersky; V S Malik; M P Timko; P A Scolnik; A R Cashmore
Journal:  Proc Natl Acad Sci U S A       Date:  1988-10       Impact factor: 11.205

Review 5.  Transcription and reverse transcription of retrotransposons.

Authors:  J D Boeke; V G Corces
Journal:  Annu Rev Microbiol       Date:  1989       Impact factor: 15.500

6.  Studies on the transposable element Ty1 of yeast. I. RNA homologous to Ty1. II. Recombination and expression of Ty1 and adjacent sequences.

Authors:  R T Elder; T P St John; D T Stinchcomb; R W Davis; S Scherer; R W Davis
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1981

7.  Tnt1, a mobile retroviral-like transposable element of tobacco isolated by plant cell genetics.

Authors:  M A Grandbastien; A Spielmann; M Caboche
Journal:  Nature       Date:  1989-01-26       Impact factor: 49.962

8.  C1- and R-dependent expression of the maize Bz1 gene requires sequences with homology to mammalian myb and myc binding sites.

Authors:  B A Roth; S A Goff; T M Klein; M E Fromm
Journal:  Plant Cell       Date:  1991-03       Impact factor: 11.277

Review 9.  Retroviruses.

Authors:  H Varmus
Journal:  Science       Date:  1988-06-10       Impact factor: 47.728

10.  Developmental expression of Drosophila melanogaster retrovirus-like transposable elements.

Authors:  S M Parkhurst; V G Corces
Journal:  EMBO J       Date:  1987-02       Impact factor: 11.598

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  31 in total

1.  MYB-related transcription factor NtMYB2 induced by wounding and elicitors is a regulator of the tobacco retrotransposon Tto1 and defense-related genes.

Authors:  K Sugimoto; S Takeda; H Hirochika
Journal:  Plant Cell       Date:  2000-12       Impact factor: 11.277

2.  Annotation of a 95-kb Populus deltoides genomic sequence reveals a disease resistance gene cluster and novel class I and class II transposable elements.

Authors:  M Lescot; S Rombauts; J Zhang; S Aubourg; C Mathé; S Jansson; P Rouzé; W Boerjan
Journal:  Theor Appl Genet       Date:  2004-04-14       Impact factor: 5.699

3.  Retrotransposons of the Tnt1B family are mobile in Nicotiana plumbaginifolia and can induce alternative splicing of the host gene upon insertion.

Authors:  A S Leprinc; M A Grandbastien; M Christian
Journal:  Plant Mol Biol       Date:  2001-11       Impact factor: 4.076

4.  Structural variability of Tvv1 grapevine retrotransposons can be caused by illegitimate recombination.

Authors:  Cédric Moisy; Sophie Blanc; Didier Merdinoglu; Frédérique Pelsy
Journal:  Theor Appl Genet       Date:  2008-01-10       Impact factor: 5.699

5.  The frequent transcriptional readthrough of the tobacco Tnt1 retrotransposon and its possible implications for the control of resistance genes.

Authors:  Inmaculada Hernández-Pinzón; Erika de Jesús; Néstor Santiago; Josep M Casacuberta
Journal:  J Mol Evol       Date:  2009-02-17       Impact factor: 2.395

6.  Untranslated leader region polymorphism of Tvv1, a retrotransposon family, is a novel marker useful for analyzing genetic diversity and relatedness in the genus Vitis.

Authors:  Frédérique Pelsy
Journal:  Theor Appl Genet       Date:  2007-10-10       Impact factor: 5.699

7.  Distribution dynamics of the Tnt1 retrotransposon in tobacco.

Authors:  Quang Hien Le; Delphine Melayah; Eric Bonnivard; Maud Petit; Marie-Angèle Grandbastien
Journal:  Mol Genet Genomics       Date:  2007-09-01       Impact factor: 3.291

8.  Activation of the Ty1-copia group retrotransposons of potato (Solatium tuberosum) during protoplast isolation.

Authors:  S R Pearce; A Kumar; A J Flavell
Journal:  Plant Cell Rep       Date:  1996-09       Impact factor: 4.570

9.  Transcriptional activation of the tobacco retrotransposon Tto1 by wounding and methyl jasmonate.

Authors:  S Takeda; K Sugimoto; H Otsuki; H Hirochika
Journal:  Plant Mol Biol       Date:  1998-02       Impact factor: 4.076

10.  The BARE-1 retrotransposon is transcribed in barley from an LTR promoter active in transient assays.

Authors:  A Suoniemi; A Narvanto; A H Schulman
Journal:  Plant Mol Biol       Date:  1996-05       Impact factor: 4.076

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