Literature DB >> 8388248

An HLA-DR typing protocol using group-specific PCR-amplification followed by restriction enzyme digests.

P Westman1, T Kuismin, J Partanen, S Koskimies.   

Abstract

A simple PCR-based protocol for HLA-DR typing suitable for a routine practice is described. The method involves, first, a PCR amplification with seven different, group-specific (DR1, DR2, DR4, DR7, DR9, DR10, and DR3+5+6+8) primer-pairs, and second, typing of HLA-DR allele more exactly in DR1, DR2, DR4, and DR3+5+6+8 groups by digestion of PCR products with restriction enzymes distinguishing different HLA-DR types within each of the groups. Altogether 24 HLA-DR alleles, or any combination of these, can be typed. The whole procedure, starting from a blood sample, can be carried out during a single working-day. The method was tested by typing a set of homozygous cell lines, as well as a local panel previously typed by PCR/oligotyping. Also, 227 patients waiting for transplantation were typed to test the method in a routine setting. The results suggest that this kind of approach gives reliable HLA-DR types and works well in the routine use.

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Year:  1993        PMID: 8388248     DOI: 10.1111/j.1744-313x.1993.tb00099.x

Source DB:  PubMed          Journal:  Eur J Immunogenet        ISSN: 0960-7420


  5 in total

1.  Genetic profiling in Graves' disease: further evidence for lack of a distinct genetic contribution to Graves' ophthalmopathy.

Authors:  Xiaoming Yin; Rauf Latif; Rebecca Bahn; Terry F Davies
Journal:  Thyroid       Date:  2012-06-04       Impact factor: 6.568

2.  Hormonal deficiencies during and after Puumala hantavirus infection.

Authors:  S Mäkelä; P Jaatinen; M Miettinen; J Salmi; I Ala-Houhala; H Huhtala; M Hurme; I Pörsti; A Vaheri; J Mustonen
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2010-04-16       Impact factor: 3.267

3.  Genetic analysis of families with autoimmune diabetes and thyroiditis: evidence for common and unique genes.

Authors:  Brian Golden; Lara Levin; Yoshiyuki Ban; Erlinda Concepcion; David A Greenberg; Yaron Tomer
Journal:  J Clin Endocrinol Metab       Date:  2005-05-31       Impact factor: 5.958

4.  Puumala hantavirus genome in patients with nephropathia epidemica: correlation of PCR positivity with HLA haplotype and link to viral sequences in local rodents.

Authors:  A Plyusnin; J Hörling; M Kanerva; J Mustonen; Y Cheng; J Partanen; O Vapalahti; S K Kukkonen; J Niemimaa; H Henttonen; B Niklasson; A Lundkvist; A Vaheri
Journal:  J Clin Microbiol       Date:  1997-05       Impact factor: 5.948

5.  An approach to mapping haplotype-specific recombination sites in human MHC class III.

Authors:  A Levo; P Westman; J Partanen
Journal:  Immunogenetics       Date:  1996       Impact factor: 2.846

  5 in total

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