Literature DB >> 8382807

Contamination of DNA database sequence entries with Escherichia coli insertion sequences.

M Binns1.   

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Year:  1993        PMID： 8382807      PMCID： PMC309200          DOI： 10.1093/nar/21.3.779

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


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  5 in total

1.  Corruption of genomic databases with anomalous sequence.

Authors:  E D Lamperti; J M Kittelberger; T F Smith; L Villa-Komaroff
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

2.  Database contamination.

Authors:  R Lopez; T Kristensen; H Prydz
Journal:  Nature       Date:  1992-01-16       Impact factor: 49.962

3.  Comparison of the spike precursor sequences of coronavirus IBV strains M41 and 6/82 with that of IBV Beaudette.

Authors:  M M Binns; M E Boursnell; F M Tomley; D K Brown
Journal:  J Gen Virol       Date:  1986-12       Impact factor: 3.891

4.  The sequence of TGF-beta 2 from Xenopus laevis.

Authors:  M L Rebbert; N Bhatia-Dey; I B Dawid
Journal:  Nucleic Acids Res       Date:  1990-04-25       Impact factor: 16.971

5.  Molecular cloning and nucleotide sequence of Thermus thermophilus HB8 trpE and trpG.

Authors:  S Sato; Y Nakada; S Kanaya; T Tanaka
Journal:  Biochim Biophys Acta       Date:  1988-09-07
  5 in total
  6 in total

1.  Contamination of sequence databases with adaptor sequences.

Authors:  T Yoshikawa; A R Sanders; S D Detera-Wadleigh
Journal:  Am J Hum Genet       Date:  1997-02       Impact factor: 11.025

2.  VecScreen_plus_taxonomy: imposing a tax(onomy) increase on vector contamination screening.

Authors:  Alejandro A Schäffer; Eric P Nawrocki; Yoon Choi; Paul A Kitts; Ilene Karsch-Mizrachi; Richard McVeigh
Journal:  Bioinformatics       Date:  2018-03-01       Impact factor: 6.937

3.  Reduced evolvability of Escherichia coli MDS42, an IS-less cellular chassis for molecular and synthetic biology applications.

Authors:  Kinga Umenhoffer; Tamás Fehér; Gabriella Balikó; Ferhan Ayaydin; János Pósfai; Frederick R Blattner; György Pósfai
Journal:  Microb Cell Fact       Date:  2010-05-21       Impact factor: 5.328

4.  Atypical regions in large genomic DNA sequences.

Authors:  S Scherer; M S McPeek; T P Speed
Journal:  Proc Natl Acad Sci U S A       Date:  1994-07-19       Impact factor: 11.205

5.  Diverse and widespread contamination evident in the unmapped depths of high throughput sequencing data.

Authors:  Richard W Lusk
Journal:  PLoS One       Date:  2014-10-29       Impact factor: 3.240

6.  Prevalence and Implications of Contamination in Public Genomic Resources: A Case Study of 43 Reference Arthropod Assemblies.

Authors:  Clementine M Francois; Faustine Durand; Emeric Figuet; Nicolas Galtier
Journal:  G3 (Bethesda)       Date:  2020-02-06       Impact factor: 3.154
  6 in total

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