Literature DB >> 8373772

Reaction mechanisms of Trp120-->Phe and wild-type glucoamylases from Aspergillus niger. Interactions with maltooligodextrins and acarbose.

K Olsen1, U Christensen, M R Sierks, B Svensson.   

Abstract

Interactions of wild-type and Trp120-->Phe glucoamylase with maltooligodextrin (Gx) substrates and the tight-binding inhibitor acarbose (A) were investigated here using stopped-flow fluorescence spectroscopy and steady-state kinetic measurements. All wild-type and Trp120-->Phe glucoamylase reactions followed the three-step model E + Gx(or A) (k1) <==> (k-1) EGx (or A) (k2) <==> (k-2) E*Gx(or A) (k3) --> E + P or E-A, previously shown to account for the glucoamylase-maltose system [Olsen, K., Svensson, B., & Christensen, U. (1992) Eur. J. Biochem. 209, 777-784]. K1 = k-1/k1, k2, and k-2, and the catalytic constant, k3, are determined. Binding of maltooligodextrins in the first reaction step is weak, with little difference between wild-type and Trp120-->Phe glucoamylase. The second step, involving a conformational change, in contrast, is strongly influenced by the mutation and by the substrate length. Here wild-type glucoamylase reacts faster and forms more stable intermediates the longer the substrate. In contrast, Trp120-->Phe reacts slower the longer the substrate. The effect of the mutation is thus smallest on maltose. The Trp120-->Phe substitution reduces the fluorescence signal only by 12-20%, indicating that other tryptophanyl residues are important in reporting the conformational change. Trp120 also strongly influences the actual catalytic step, since the mutation decreases the kc values 30-80-fold. Acarbose behaves similar to maltotetraose in the first and the second steps with wild-type but not the Trp120-->Phe glucoamylase. Also, a third step in the acarbose reaction which parallels the catalytic step is strongly affected by the mutation. The rate constant k3 increases 200-fold.

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Year:  1993        PMID: 8373772     DOI: 10.1021/bi00088a021

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  8 in total

1.  pH-dependence of the fast step of maltose hydrolysis catalysed by glucoamylase G1 from Aspergillus niger.

Authors:  U Christensen
Journal:  Biochem J       Date:  2000-07-15       Impact factor: 3.857

2.  Presteady-state kinetics of Bacillus 1,3-1,4-beta-glucanase: binding and hydrolysis of a 4-methylumbelliferyl trisaccharide substrate.

Authors:  M Abel; A Planas; U Christensen
Journal:  Biochem J       Date:  2001-07-01       Impact factor: 3.857

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Journal:  Biochemistry       Date:  2010-03-30       Impact factor: 3.162

4.  Pre-steady-state kinetics of Bacillus licheniformis 1,3-1,4-beta-glucanase: evidence for a regulatory binding site.

Authors:  Mireia Abel; Karin Iversen; Antoni Planas; Ulla Christensen
Journal:  Biochem J       Date:  2003-05-01       Impact factor: 3.857

5.  Eukaryotic initiation factor (eIF) 4F binding to barley yellow dwarf virus (BYDV) 3'-untranslated region correlates with translation efficiency.

Authors:  Bidisha Banerjee; Dixie J Goss
Journal:  J Biol Chem       Date:  2013-12-30       Impact factor: 5.157

6.  Phosphorylation of eukaryotic initiation factor eIFiso4E enhances the binding rates to VPg of turnip mosaic virus.

Authors:  Mateen A Khan; Pankaj Kumar; Mohd Akif; Hiroshi Miyoshi
Journal:  PLoS One       Date:  2021-11-04       Impact factor: 3.240

7.  Glycoside hydrolase stabilization of transition state charge: new directions for inhibitor design.

Authors:  Weiwu Ren; Marco Farren-Dai; Natalia Sannikova; Katarzyna Świderek; Yang Wang; Oluwafemi Akintola; Robert Britton; Vicent Moliner; Andrew J Bennet
Journal:  Chem Sci       Date:  2020-09-16       Impact factor: 9.825

8.  Stereoselective synthesis of a 4-⍺-glucoside of valienamine and its X-ray structure in complex with Streptomyces coelicolor GlgE1-V279S.

Authors:  Anshupriya Si; Thilina D Jayasinghe; Radhika Thanvi; Donald R Ronning; Steven J Sucheck
Journal:  Sci Rep       Date:  2021-06-28       Impact factor: 4.379

  8 in total

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