Literature DB >> 8355695

Selective DNA bending by a variety of bZIP proteins.

T K Kerppola1, T Curran.   

Abstract

We have investigated DNA bending by bZIP family proteins that can bind to the AP-1 site. DNA bending is widespread, although not universal, among members of this family. Different bZIP protein dimers induced distinct DNA bends. The DNA bend angles ranged from virtually 0 to greater than 40 degrees as measured by phasing analysis and were oriented toward both the major and the minor grooves at the center of the AP-1 site. The DNA bends induced by the various heterodimeric complexes suggested that each component of the complex induced an independent DNA bend as previously shown for Fos and Jun. The Fos-related proteins Fra1 and Fra2 bent DNA in the same orientation as Fos but induced smaller DNA bend angles. ATF2 also bent DNA toward the minor groove in heterodimers formed with Fos, Fra2, and Jun. CREB and ATF1, which favor binding to the CRE site, did not induce significant DNA bending. Zta, which is a divergent member of the bZIP family, bent DNA toward the major groove. A variety of DNA structures can therefore be induced at the AP-1 site through combinatorial interactions between different bZIP family proteins. This diversity of DNA structures may contribute to regulatory specificity among the plethora of proteins that can bind to the AP-1 site.

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Year:  1993        PMID: 8355695      PMCID: PMC360261          DOI: 10.1128/mcb.13.9.5479-5489.1993

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  29 in total

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Authors:  H A Abdel-Hafiz; L E Heasley; J M Kyriakis; J Avruch; D J Kroll; G L Johnson; J P Hoeffler
Journal:  Mol Endocrinol       Date:  1992-12

2.  Myc/Max and other helix-loop-helix/leucine zipper proteins bend DNA toward the minor groove.

Authors:  D E Fisher; L A Parent; P A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-15       Impact factor: 11.205

3.  The GCN4 basic region leucine zipper binds DNA as a dimer of uninterrupted alpha helices: crystal structure of the protein-DNA complex.

Authors:  T E Ellenberger; C J Brandl; K Struhl; S C Harrison
Journal:  Cell       Date:  1992-12-24       Impact factor: 41.582

4.  Overexpression and purification of transcriptionally competent CREB from a recombinant baculovirus.

Authors:  C Y Chen; D H Bessesen; S M Jackson; J P Hoeffler
Journal:  Protein Expr Purif       Date:  1991 Oct-Dec       Impact factor: 1.650

5.  DNA bend direction by phase sensitive detection.

Authors:  S S Zinkel; D M Crothers
Journal:  Nature       Date:  1987 Jul 9-15       Impact factor: 49.962

6.  An altered DNA conformation in origin region I is a determinant for the binding of SV40 large T antigen.

Authors:  K Ryder; S Silver; A L DeLucia; E Fanning; P Tegtmeyer
Journal:  Cell       Date:  1986-03-14       Impact factor: 41.582

7.  Fos is a preferential target of glucocorticoid receptor inhibition of AP-1 activity in vitro.

Authors:  T K Kerppola; D Luk; T Curran
Journal:  Mol Cell Biol       Date:  1993-06       Impact factor: 4.272

8.  fra-1: a serum-inducible, cellular immediate-early gene that encodes a fos-related antigen.

Authors:  D R Cohen; T Curran
Journal:  Mol Cell Biol       Date:  1988-05       Impact factor: 4.272

9.  Jun family members are controlled by a calcium-regulated, cyclosporin A-sensitive signaling pathway in activated T lymphocytes.

Authors:  K S Ullman; J P Northrop; A Admon; G R Crabtree
Journal:  Genes Dev       Date:  1993-02       Impact factor: 11.361

10.  Fos and Jun repress transcriptional activation by myogenin and MyoD: the amino terminus of Jun can mediate repression.

Authors:  L Li; J C Chambard; M Karin; E N Olson
Journal:  Genes Dev       Date:  1992-04       Impact factor: 11.361

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  63 in total

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Authors:  S B Hardin; C J Ortler; K J McNamara-Schroeder; W E Stumph
Journal:  Nucleic Acids Res       Date:  2000-07-15       Impact factor: 16.971

2.  Asymmetric recognition of nonconsensus AP-1 sites by Fos-Jun and Jun-Jun influences transcriptional cooperativity with NFAT1.

Authors:  Vladimir Ramirez-Carrozzi; Tom Kerppola
Journal:  Mol Cell Biol       Date:  2003-03       Impact factor: 4.272

3.  alphaNAC requires an interaction with c-Jun to exert its transcriptional coactivation.

Authors:  Isabelle Quèlo; Mélanie Hurtubise; René St-Arnaud
Journal:  Gene Expr       Date:  2002

4.  The role of a basic amino acid cluster in target site selection and non-specific binding of bZIP peptides to DNA.

Authors:  S J Metallo; D N Paolella; A Schepartz
Journal:  Nucleic Acids Res       Date:  1997-08-01       Impact factor: 16.971

5.  Simultaneous visualization of multiple protein interactions in living cells using multicolor fluorescence complementation analysis.

Authors:  Chang-Deng Hu; Tom K Kerppola
Journal:  Nat Biotechnol       Date:  2003-04-14       Impact factor: 54.908

6.  cAMP/CREB-mediated transcriptional regulation of ectonucleoside triphosphate diphosphohydrolase 1 (CD39) expression.

Authors:  Hui Liao; Matthew C Hyman; Amy E Baek; Keigo Fukase; David J Pinsky
Journal:  J Biol Chem       Date:  2010-02-23       Impact factor: 5.157

7.  Differential roles for Fos and Jun in DNA-binding: redox-dependent and independent functions.

Authors:  L Ng; D Forrest; T Curran
Journal:  Nucleic Acids Res       Date:  1993-12-25       Impact factor: 16.971

8.  The C-terminal domain of c-fos is required for activation of an AP-1 site specific for jun-fos heterodimers.

Authors:  K McBride; M Nemer
Journal:  Mol Cell Biol       Date:  1998-09       Impact factor: 4.272

9.  DNA bending by thyroid hormone receptor: influence of half-site spacing and RXR.

Authors:  K Shulemovich; D D Dimaculangan; D Katz; M A Lazar
Journal:  Nucleic Acids Res       Date:  1995-03-11       Impact factor: 16.971

10.  Role of activator protein-1 in the down-regulation of the human CYP2J2 gene in hypoxia.

Authors:  Nicole Y Marden; Eva Fiala-Beer; Shi-Hua Xiang; Michael Murray
Journal:  Biochem J       Date:  2003-08-01       Impact factor: 3.857

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