Literature DB >> 8341605

The importance of downstream delta-factor binding elements for the activity of the rpL32 promoter.

S Chung1, R P Perry.   

Abstract

A salient feature of mammalian ribosomal protein genes is the location of promoter elements downstream, as well as upstream, of the transcriptional start point. Previous functional studies of the mouse rpL32 gene (Chung and Perry, Mol. Cell. Biol. 9, 2075; 1989) indicated that the first intron of this gene contains such an element. We show here that this element encompasses a binding site for a zinc finger nuclear protein known as delta (YY-1, muE1, UCRBP). The intronic delta site (delta i) is located 32 bp downstream of another delta site in the first exon (delta e). Transfection experiments with genes containing deleterious mutations in one or both delta sites or having alterations in the spacing between the sites indicate that the two delta elements function independently and contribute additively to the overall strength of the rpL32 promoter. Moreover, the contribution of the delta i element is the same whether it is oriented parallel or antiparallel to the delta e element. Together, the two delta elements raise the expression level about 10-fold over that attained by the upstream and initiator portions of the promoter. The positive role of the delta factor in rpL32 expression contrasts strikingly with its repressive role in various other genes.

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Year:  1993        PMID: 8341605      PMCID: PMC309771          DOI: 10.1093/nar/21.14.3301

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

1.  Cell-free transcription of a mouse ribosomal-protein-encoding gene: the effects of promoter mutations.

Authors:  S Chung; R P Perry
Journal:  Gene       Date:  1991-04       Impact factor: 3.688

2.  Identification, characterization, and cell specificity of a human LINE-1 promoter.

Authors:  G D Swergold
Journal:  Mol Cell Biol       Date:  1990-12       Impact factor: 4.272

3.  Negative regulation of the BZLF1 promoter of Epstein-Barr virus.

Authors:  E A Montalvo; Y Shi; T E Shenk; A J Levine
Journal:  J Virol       Date:  1991-07       Impact factor: 5.103

4.  Transcriptional repression by YY1, a human GLI-Krüppel-related protein, and relief of repression by adenovirus E1A protein.

Authors:  Y Shi; E Seto; L S Chang; T Shenk
Journal:  Cell       Date:  1991-10-18       Impact factor: 41.582

5.  Common factor 1 is a transcriptional activator which binds in the c-myc promoter, the skeletal alpha-actin promoter, and the immunoglobulin heavy-chain enhancer.

Authors:  K J Riggs; K T Merrell; G Wilson; K Calame
Journal:  Mol Cell Biol       Date:  1991-03       Impact factor: 4.272

6.  The bidirectional promoter of the divergently transcribed mouse Surf-1 and Surf-2 genes.

Authors:  A C Lennard; M Fried
Journal:  Mol Cell Biol       Date:  1991-03       Impact factor: 4.272

7.  Equipotent mouse ribosomal protein promoters have a similar architecture that includes internal sequence elements.

Authors:  N Hariharan; D E Kelley; R P Perry
Journal:  Genes Dev       Date:  1989-11       Impact factor: 11.361

8.  The mouse rpL7a gene is typical of other ribosomal protein genes in it's 5' region but differs in being located in a tight cluster of CpG-rich islands.

Authors:  C Huxley; M Fried
Journal:  Nucleic Acids Res       Date:  1990-09-25       Impact factor: 16.971

9.  The mouse ribosomal protein L7 gene. Its primary structure and functional analysis of the promoter region.

Authors:  O Meyuhas; A Klein
Journal:  J Biol Chem       Date:  1990-07-15       Impact factor: 5.157

10.  An element downstream of the cap site is required for transcription of the gene encoding mouse ribosomal protein L32.

Authors:  R Moura-Neto; K P Dudov; R P Perry
Journal:  Proc Natl Acad Sci U S A       Date:  1989-06       Impact factor: 11.205

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  13 in total

1.  DNA binding sites for the transcriptional activator/repressor YY1.

Authors:  R P Hyde-DeRuyscher; E Jennings; T Shenk
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

2.  YY1 and c-Myc associate in vivo in a manner that depends on c-Myc levels.

Authors:  A Shrivastava; J Yu; S Artandi; K Calame
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-01       Impact factor: 11.205

3.  Characterization of two novel YY1 binding sites in the polyomavirus late promoter.

Authors:  F Martelli; C Iacobini; M Caruso; A Felsani
Journal:  J Virol       Date:  1996-03       Impact factor: 5.103

4.  A functional YY1 binding site is necessary and sufficient to activate Surf-1 promoter activity in response to serum growth factors.

Authors:  E G Cole; K Gaston
Journal:  Nucleic Acids Res       Date:  1997-09-15       Impact factor: 16.971

5.  Nuclear factor YY1 activates the mammalian F0F1 ATP synthase alpha-subunit gene.

Authors:  G A Breen; C A Vander Zee; E M Jordan
Journal:  Gene Expr       Date:  1996

Review 6.  An analysis of genes regulated by the multi-functional transcriptional regulator Yin Yang-1.

Authors:  A Shrivastava; K Calame
Journal:  Nucleic Acids Res       Date:  1994-12-11       Impact factor: 16.971

7.  Functional three-domain single-chain T-cell receptors.

Authors:  S Chung; K W Wucherpfennig; S M Friedman; D A Hafler; J L Strominger
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-20       Impact factor: 11.205

8.  Intron-dependent transient expression of the maize GapA1 gene.

Authors:  M Donath; R Mendel; R Cerff; W Martin
Journal:  Plant Mol Biol       Date:  1995-07       Impact factor: 4.076

9.  Functional characterization of transcriptional regulatory elements in the upstream region and intron 1 of the human S6 ribosomal protein gene.

Authors:  M Antoine; P Kiefer
Journal:  Biochem J       Date:  1998-12-01       Impact factor: 3.857

10.  Genome-wide analysis of YY2 versus YY1 target genes.

Authors:  Li Chen; Toshi Shioda; Kathryn R Coser; Mary C Lynch; Chuanwei Yang; Emmett V Schmidt
Journal:  Nucleic Acids Res       Date:  2010-03-09       Impact factor: 16.971

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