Literature DB >> 8334191

A method for constructing data-based models of spiking neurons using a dynamic linear-static nonlinear cascade.

M G Paulin1.   

Abstract

This paper describes a general nonlinear dynamical model for neural system identification. It describes an algorithm for fitting a simple form of the model to spike train data, and reports on this algorithm's performance in identifying the structure and parameters of simulated neurons. The central element of the model is a Wiener-Bose dynamic nonlinearity that ensures that the model is able to approximate the behaviour of an arbitrary nonlinear dynamical system. Nonlinearities associated with spike generation and transmission are treated by placing the Wiener-Bose system in cascade with pulse frequency modulators and demodulators, and the static nonlinearity at the output of the Wiener-Bose system is decomposed into a rectifier and a multinomial. This simplifies the model without reducing its generality for neuronal system identification. Model elements can be characterised using standard methods of dynamical systems analysis, and the model has a simple form that can be implemented and simulated efficiently. This model bears a structural resemblance to real neurons; it may be regarded as a connectionist "neuron" that has been generalized in a realistic way to enable it to mimic the behaviour of an arbitrary nonlinear system, or conversely as a general nonlinear model that has been constrained to make it easy to fit to spike train data. Tests with simulated data show that the identification algorithm can accurately estimate the structure and parameters of neuron-like nonlinear dynamical systems using data sets containing only a few hundred spikes.

Mesh:

Year:  1993        PMID: 8334191     DOI: 10.1007/bf00201409

Source DB:  PubMed          Journal:  Biol Cybern        ISSN: 0340-1200            Impact factor:   2.086


  10 in total

Review 1.  Signal transformation and coding in neural systems.

Authors:  V Z Marmarelis
Journal:  IEEE Trans Biomed Eng       Date:  1989-01       Impact factor: 4.538

2.  Digital filters for firing rate estimation.

Authors:  M G Paulin
Journal:  Biol Cybern       Date:  1992       Impact factor: 2.086

3.  Dissection of a nonlinear cascade model for sensory encoding.

Authors:  A S French; M J Korenberg
Journal:  Ann Biomed Eng       Date:  1991       Impact factor: 3.934

4.  The identification of nonlinear biological systems: Wiener and Hammerstein cascade models.

Authors:  I W Hunter; M J Korenberg
Journal:  Biol Cybern       Date:  1986       Impact factor: 2.086

5.  Applications of minimum-order Wiener modeling to retinal ganglion cell spatiotemporal dynamics.

Authors:  M C Citron; V Z Marmarelis
Journal:  Biol Cybern       Date:  1987       Impact factor: 2.086

6.  Minimum-order Wiener modelling of spike-output systems.

Authors:  V Z Marmarelis; M C Citron; C P Vivo
Journal:  Biol Cybern       Date:  1986       Impact factor: 2.086

7.  Identifying nonlinear difference equation and functional expansion representations: the fast orthogonal algorithm.

Authors:  M J Korenberg
Journal:  Ann Biomed Eng       Date:  1988       Impact factor: 3.934

8.  White-noise analysis of nonlinear behavior in an insect sensory neuron: kernel and cascade approaches.

Authors:  M J Korenberg; A S French; S K Voo
Journal:  Biol Cybern       Date:  1988       Impact factor: 2.086

9.  Brain modeling by tensor network theory and computer simulation. The cerebellum: distributed processor for predictive coordination.

Authors:  A Pellionisz; R Llinás
Journal:  Neuroscience       Date:  1979       Impact factor: 3.590

10.  Spectral analysis of pulse frequency modulation in the nervous systems.

Authors:  E J Bayly
Journal:  IEEE Trans Biomed Eng       Date:  1968-10       Impact factor: 4.538

  10 in total
  2 in total

1.  Directional sensitivity of tuberous electroreceptors: polarity preferences and frequency tuning.

Authors:  J R McKibben; C D Hopkins; D D Yager
Journal:  J Comp Physiol A       Date:  1993-10       Impact factor: 1.836

2.  Modeling of deep breath vasoconstriction reflex.

Authors:  Patjanaporn Chalacheva; Michael C K Khoo
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2015
  2 in total

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