Literature DB >> 8307784

Characterization of 4AOHW cell line panel including new data for the 10IHW panel.

M A Degli-Esposti1, M S Griffiths, L N Daly, C S Witt, M Simons, C Carcassi, E D Albert, M J Giphart, R L Dawkins.   

Abstract

There will be a continuing need for well characterized panels of EBV-transformed lymphoblastoid cell lines. Selection of the 4AOH panel was based on prior MHC typing and was intended to ensure representation of ancestral haplotypes from various racial groups. Cells from nonhuman primates, bone marrow donor-recipient pairs, and patients with IDDM were included. Selected cells from the 10IHW were included to enable further characterization. Cells were distributed to participants in the 4AOHW and were typed at multiple loci by a variety of procedures. Non-HLA genes such as TNF were included. Since the cells were distributed "blind" with hidden replicates, it was possible to evaluate the quality of the typing data. An approach to data management is described. The best current estimates of the typing of these cells are presented. The panel will be useful since it provides standards for most alleles at most loci. Since the cells are so well characterized, they represent a useful resource for MHC sequencing and for the evaluation of new typing procedures.

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Year:  1993        PMID: 8307784     DOI: 10.1016/0198-8859(93)90514-2

Source DB:  PubMed          Journal:  Hum Immunol        ISSN: 0198-8859            Impact factor:   2.850


  5 in total

1.  Identification of the novel HLA-DPB1*5801 allele detected by sequenced based typing.

Authors:  L F Versluis; L N Daly; M A Degli-Eposti; A W van der Zwan; R L Dawkins; M G Tilanus
Journal:  Immunogenetics       Date:  1995       Impact factor: 2.846

2.  PERB11 (MIC): a polymorphic MHC gene is expressed in skin and single nucleotide polymorphisms are associated with psoriasis.

Authors:  G K Tay; J Hui; S Gaudieri; M Schmitt-Egenolf; O P Martinez; C Leelayuwat; J F Williamson; T H Eiermann; R L Dawkins
Journal:  Clin Exp Immunol       Date:  2000-03       Impact factor: 4.330

3.  Beta 2-microglobulin gene mutations: a study of established colorectal cell lines and fresh tumors.

Authors:  D C Bicknell; A Rowan; W F Bodmer
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-24       Impact factor: 11.205

4.  A new polymorphic and multicopy MHC gene family related to nonmammalian class I.

Authors:  C Leelayuwat; D C Townend; M A Degli-Esposti; L J Abraham; R L Dawkins
Journal:  Immunogenetics       Date:  1994       Impact factor: 2.846

5.  HLA-B57 micropolymorphism defines the sequence and conformational breadth of the immunopeptidome.

Authors:  Patricia T Illing; Phillip Pymm; Nathan P Croft; Hugo G Hilton; Vladimir Jojic; Alex S Han; Juan L Mendoza; Nicole A Mifsud; Nadine L Dudek; James McCluskey; Peter Parham; Jamie Rossjohn; Julian P Vivian; Anthony W Purcell
Journal:  Nat Commun       Date:  2018-11-08       Impact factor: 14.919

  5 in total

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