Literature DB >> 8299946

The gamma-tubulin-encoding gene from the basidiomycete fungus, Ustilago violacea, has a long 5'-untranslated region.

H Luo1, M H Perlin.   

Abstract

The gene (gamma-tub) encoding gamma-tubulin (gamma-Tub) was isolated from a cosmid library constructed for Ustilago violacea by using a PCR-amplified DNA fragment as a probe. About 2.8 kb of DNA sequence was analyzed and found to encode a protein of 469 amino acids highly homologous to the gamma-Tub from other organisms. There were eight introns interrupting the coding sequence. A 'TATA'-like sequence was found 389 bp upstream from the initial Met codon. No polyadenylation signal was found in the 3' non-coding region. Southern blot analyses indicated that gamma-tub is a single-copy gene. Northern blot analyses indicated that a 1.81-kb RNA species was transcribed. Primer extension experiments determined that the transcription start point (tsp) is at 58 bp downstream from the putative TATA box, with another possible tsp at 95 bp downstream. The long 5' non-coding sequence of the RNA contained several small open reading frames; their possible roles in the regulation of gamma-tub translation are discussed.

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Year:  1993        PMID: 8299946     DOI: 10.1016/0378-1119(93)90005-n

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  5 in total

1.  An ste20 homologue in Ustilago maydis plays a role in mating and pathogenicity.

Authors:  David G Smith; Maria D Garcia-Pedrajas; Wei Hong; Zhanyang Yu; Scott E Gold; Michael H Perlin
Journal:  Eukaryot Cell       Date:  2004-02

2.  Analysis of Tub4p, a yeast gamma-tubulin-like protein: implications for microtubule-organizing center function.

Authors:  L G Marschall; R L Jeng; J Mulholland; T Stearns
Journal:  J Cell Biol       Date:  1996-07       Impact factor: 10.539

3.  gamma-tubulin is a minus end-specific microtubule binding protein.

Authors:  Q Li; H C Joshi
Journal:  J Cell Biol       Date:  1995-10       Impact factor: 10.539

4.  Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus.

Authors:  Michael H Perlin; Joelle Amselem; Eric Fontanillas; Su San Toh; Zehua Chen; Jonathan Goldberg; Sebastien Duplessis; Bernard Henrissat; Sarah Young; Qiandong Zeng; Gabriela Aguileta; Elsa Petit; Helene Badouin; Jared Andrews; Dominique Razeeq; Toni Gabaldón; Hadi Quesneville; Tatiana Giraud; Michael E Hood; David J Schultz; Christina A Cuomo
Journal:  BMC Genomics       Date:  2015-06-16       Impact factor: 3.969

5.  A highly divergent gamma-tubulin gene is essential for cell growth and proper microtubule organization in Saccharomyces cerevisiae.

Authors:  S G Sobel; M Snyder
Journal:  J Cell Biol       Date:  1995-12       Impact factor: 10.539

  5 in total

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