Literature DB >> 8286364

Site-directed mutagenesis, fluorescence, and two-dimensional NMR studies on microenvironments of effector region aromatic residues of human c-Ha-Ras protein.

K Yamasaki1, M Shirouzu, Y Muto, J Fujita-Yoshigaki, H Koide, Y Ito, G Kawai, S Hattori, S Yokoyama, S Nishimura.   

Abstract

The Tyr residues in positions 32 and 40 of human c-Ha-Ras protein were replaced by site-directed mutagenesis (Y32F, Y32W, Y40K, and Y40W) to examine their roles in the signal-transducing activity and the sensitivity to the GTPase activating protein (GAP). The signal-transducing activity of the oncogenic Ras protein in PC12 cells was lost upon mutations Y32F and Y40K, but retained upon mutations Y32W and Y40W. These results suggest that residues 32 and 40 are both required to have aromatic groups and residue 32 is further required to have a hydrogen donor. On the other hand, three mutations (Y32F, Y32W, and Y40W) caused no appreciable reduction in either GAP-binding affinity or GAP sensitivity. By the Y40K mutation, GAP-binding affinity was slightly lowered, while GAP sensitivity was drastically impaired. Therefore, for residues 32 and 40 of Ras, interactions with GAP appear to be different from those with the target of signal transduction in the PC12 cell. As for the Y32W-Ras protein bound with an unhydrolyzable GTP analogue (GMPPNP), the Trp32 fluorescence is appreciably red-shifted, weaker, and more susceptible to KI quenching as compared to that of the GDP-bound form. Two-dimensional NMR spectroscopy with selectively deuterated Ras proteins revealed fewer and weaker nuclear Overhauser effects on the aromatic protons of Trp32 in the GMPPNP-bound form than in the GDP-bound form. This indicates that the side chain of Trp32 is more exposed to the solvent in the GMPPNP-bound form than in the GDP-bound form.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1994        PMID: 8286364     DOI: 10.1021/bi00167a009

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  6 in total

1.  The Ras mutant D119N is both dominant negative and activated.

Authors:  R H Cool; G Schmidt; C U Lenzen; H Prinz; D Vogt; A Wittinghofer
Journal:  Mol Cell Biol       Date:  1999-09       Impact factor: 4.272

2.  Reversible movement of switch 1 loop of myosin determines actin interaction.

Authors:  Bálint Kintses; Máté Gyimesi; David S Pearson; Michael A Geeves; Wei Zeng; Clive R Bagshaw; András Málnási-Csizmadia
Journal:  EMBO J       Date:  2007-01-10       Impact factor: 11.598

3.  Crystal structures of the small G protein Rap2A in complex with its substrate GTP, with GDP and with GTPgammaS.

Authors:  J Cherfils; J Ménétrey; G Le Bras; I Janoueix-Lerosey; J de Gunzburg; J R Garel; I Auzat
Journal:  EMBO J       Date:  1997-09-15       Impact factor: 11.598

4.  An economical method for producing stable-isotope labeled proteins by the E. coli cell-free system.

Authors:  Jun Yokoyama; Takayoshi Matsuda; Seizo Koshiba; Takanori Kigawa
Journal:  J Biomol NMR       Date:  2010-11-04       Impact factor: 2.835

5.  Improving cell-free protein synthesis for stable-isotope labeling.

Authors:  Takayoshi Matsuda; Seizo Koshiba; Naoya Tochio; Eiko Seki; Noriyuki Iwasaki; Takashi Yabuki; Makoto Inoue; Shigeyuki Yokoyama; Takanori Kigawa
Journal:  J Biomol NMR       Date:  2007-01-20       Impact factor: 2.835

6.  Tyrosyl phosphorylation of KRAS stalls GTPase cycle via alteration of switch I and II conformation.

Authors:  Yoshihito Kano; Teklab Gebregiworgis; Christopher B Marshall; Nikolina Radulovich; Betty P K Poon; Jonathan St-Germain; Jonathan D Cook; Ivette Valencia-Sama; Benjamin M M Grant; Silvia Gabriela Herrera; Jinmin Miao; Brian Raught; Meredith S Irwin; Jeffrey E Lee; Jen Jen Yeh; Zhong-Yin Zhang; Ming-Sound Tsao; Mitsuhiko Ikura; Michael Ohh
Journal:  Nat Commun       Date:  2019-01-15       Impact factor: 14.919

  6 in total

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