Literature DB >> 8279127

Fowlpox virus encodes a protein related to human deoxycytidine kinase: further evidence for independent acquisition of genes for enzymes of nucleotide metabolism by different viruses.

E V Koonin1, T G Senkevich.   

Abstract

It is demonstrated that fowlpox virus (FPV) protein FP26 located in the HindIII D fragment of the genome is related to the human deoxycytidine kinase (dCK) and probably possesses the same enzymatic activity. A homologous protein is not encoded by vaccinia virus. A multiple alignment of the amino acid sequences of the human and FPV dCKs, the thymidine kinases (TK) of herpesviruses, and cellular and vaccinia virus thymidylate kinases (ThyK) was generated and the conserved motifs, at least two of which are implicated in ATP binding, were characterized. An apparent duplication of ATP-binding motif B in the dCKs was revealed, leading to the reassignment of one of the catalytic residues. Phylogenetic analysis based on the multiple alignment suggested that the putative dCK of FPV probably has diverged from the common ancestor with the human dCK at a later stage of evolution than the herpesvirus TKs, with the ThyKs being peripheral members of the family. These results are compatible with hypothesis that genes for enzymes of nucleotide metabolism could be acquired independently by different DNA viruses (Koonin, E.V. and Senkevich, T.G., Virus Genes 6:187-196, 1992).

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Year:  1993        PMID: 8279127     DOI: 10.1007/bf01702589

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  22 in total

1.  Herpesviral deoxythymidine kinases contain a site analogous to the phosphoryl-binding arginine-rich region of porcine adenylate kinase; comparison of secondary structure predictions and conservation.

Authors:  N K Balasubramaniam; V Veerisetty; G A Gentry
Journal:  J Gen Virol       Date:  1990-12       Impact factor: 3.891

2.  Nucleotide sequence of 42 kbp of vaccinia virus strain WR from near the right inverted terminal repeat.

Authors:  G L Smith; Y S Chan; S T Howard
Journal:  J Gen Virol       Date:  1991-06       Impact factor: 3.891

3.  Molecular cloning and expression of the human deoxythymidylate kinase gene in yeast.

Authors:  J Y Su; R A Sclafani
Journal:  Nucleic Acids Res       Date:  1991-02-25       Impact factor: 16.971

4.  Structure of the recA protein-ADP complex.

Authors:  R M Story; T A Steitz
Journal:  Nature       Date:  1992-01-23       Impact factor: 49.962

Review 5.  Viral proteins containing the purine NTP-binding sequence pattern.

Authors:  A E Gorbalenya; E V Koonin
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

6.  Decreased virulence of recombinant vaccinia virus expression vectors is associated with a thymidine kinase-negative phenotype.

Authors:  R M Buller; G L Smith; K Cremer; A L Notkins; B Moss
Journal:  Nature       Date:  1985 Oct 31-Nov 6       Impact factor: 49.962

7.  Nucleotide sequence analysis of a 10.5 kbp HindIII fragment of fowlpox virus: relatedness to the central portion of the vaccinia virus HindIII D region.

Authors:  J Tartaglia; J Winslow; S Goebel; G P Johnson; J Taylor; E Paoletti
Journal:  J Gen Virol       Date:  1990-07       Impact factor: 3.891

8.  Vaccinia virus encodes four putative DNA and/or RNA helicases distantly related to each other.

Authors:  E V Koonin; T G Senkevich
Journal:  J Gen Virol       Date:  1992-04       Impact factor: 3.891

9.  Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold.

Authors:  J E Walker; M Saraste; M J Runswick; N J Gay
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

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  3 in total

1.  The genome of fowlpox virus.

Authors:  C L Afonso; E R Tulman; Z Lu; L Zsak; G F Kutish; D L Rock
Journal:  J Virol       Date:  2000-04       Impact factor: 5.103

2.  The genome of Melanoplus sanguinipes entomopoxvirus.

Authors:  C L Afonso; E R Tulman; Z Lu; E Oma; G F Kutish; D L Rock
Journal:  J Virol       Date:  1999-01       Impact factor: 5.103

3.  Nucleotide sequence of the 4.3 kbp BamHI-N fragment of fowlpox virus FP9.

Authors:  E Pollitt; M A Skinner; S Heaphy
Journal:  Virus Genes       Date:  1998       Impact factor: 2.198

  3 in total

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