Literature DB >> 8268911

A tight cluster of five unrelated human genes on chromosome 16q22.1.

F Larsen1, J Solheim, T Kristensen, A B Kolstø, H Prydz.   

Abstract

A locus on human chromosome 16q22.1 contains at least five tightly clustered genes which are unrelated by sequence homology and apparently unrelated by function. The genes for a putative proteasome subunit (MECL 1), a chymotrypsin-like protease (CTRL), a protein serine kinase (PSKH1), the previously cloned lecithin:cholesterol acyl transferase (LCAT) and a protein of unknown function are found within 40 kb of genomic DNA. Exons from the former four genes are located within a 12 kb region including a CpG island associated with the putative proteasome gene. Three of the genes are widely expressed, whereas the genes for the protease and LCAT are highly tissue specific. The distance between the transcriptional units of the gene upstream of LCAT and LCAT is only 199 bp. Alternative polyadenylation of the protease transcripts creates a transcription unit which overlaps with the oppositely oriented kinase gene. The selective advantage of this unusual gene clustering may involve transcriptional interference(s) and coregulatory events not yet understood. Given the current estimate of about 100,000 genes in the human genome, our findings support the notion that genes are not evenly distributed.

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Year:  1993        PMID: 8268911     DOI: 10.1093/hmg/2.10.1589

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  18 in total

1.  A human CpG island randomly inserted into a plant genome is protected from methylation.

Authors:  Trine Johansen Meza; Espen Enerly; Bente Børu; Frank Larsen; Abul Mandal; Reidunn B Aalen; Kjetill S Jakobsen
Journal:  Transgenic Res       Date:  2002-04       Impact factor: 2.788

2.  The subunits MECL-1 and LMP2 are mutually required for incorporation into the 20S proteasome.

Authors:  M Groettrup; S Standera; R Stohwasser; P M Kloetzel
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-19       Impact factor: 11.205

Review 3.  Regulation of K-Cl cotransport: from function to genes.

Authors:  N C Adragna; M Di Fulvio; P K Lauf
Journal:  J Membr Biol       Date:  2004-10-01       Impact factor: 1.843

4.  Immunoproteasome subunit LMP2 expression is deregulated in Sjogren's syndrome but not in other autoimmune disorders.

Authors:  S Krause; U Kuckelkorn; T Dörner; G-R Burmester; E Feist; P-M Kloetzel
Journal:  Ann Rheum Dis       Date:  2006-01-13       Impact factor: 19.103

5.  Chromosomal localization of the proteasome Z subunit gene reveals an ancient chromosomal duplication involving the major histocompatibility complex.

Authors:  M Kasahara; M Hayashi; K Tanaka; H Inoko; K Sugaya; T Ikemura; T Ishibashi
Journal:  Proc Natl Acad Sci U S A       Date:  1996-08-20       Impact factor: 11.205

6.  Subpopulations of proteasomes in rat liver nuclei, microsomes and cytosol.

Authors:  A Palmer; A J Rivett; S Thomson; K B Hendil; G W Butcher; G Fuertes; E Knecht
Journal:  Biochem J       Date:  1996-06-01       Impact factor: 3.857

7.  Divergent intron arrangement in the MB1/LMP7 proteasome gene pair.

Authors:  S Abdulla; S Beck; M Belich; A Jackson; T Nakamura; J Trowsdale
Journal:  Immunogenetics       Date:  1996       Impact factor: 2.846

Review 8.  Alternative poly(A) site selection in complex transcription units: means to an end?

Authors:  G Edwalds-Gilbert; K L Veraldi; C Milcarek
Journal:  Nucleic Acids Res       Date:  1997-07-01       Impact factor: 16.971

9.  High-resolution mapping of a linkage group on mouse chromosome 8 conserved on human chromosome 16Q.

Authors:  J Becker-Follmann; A Gaa; E Baùsch; E Natt; G Scherer; O von Deimling
Journal:  Mamm Genome       Date:  1997-03       Impact factor: 2.957

10.  Processing of N3, a mammalian proteasome beta-type subunit.

Authors:  S Thomson; A J Rivett
Journal:  Biochem J       Date:  1996-05-01       Impact factor: 3.857

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