Literature DB >> 8252072

Isolation and characterization of two related Arabidopsis ocs-element bZIP binding proteins.

B Zhang1, R C Foley, K B Singh.   

Abstract

Ocs-elements are a group of related, bipartite promoter elements which have been exploited by two distinct groups of plant pathogens, Agrobacterium and certain viruses to express genes in plants. The genes for two Arabidopsis bZIP (basic region-leucine zipper) proteins that bind to ocs-elements have been isolated and characterized. The genes, called OBF4 and OBF5, were isolated by screening an Arabidopsis genomic library with degenerate oligonucleotides complementary to the DNA-binding domains of other plant ocs-element-binding proteins. The OBF4 and OBF5 proteins show 53% amino acid identity but low DNA homology. Southern blot analysis demonstrated that each of the OBF genes is a member of a small family. OBF4 is more similar to the tobacco TGA1a and Arabidopsis TGA1 proteins, while OBF5 is more similar to the maize OBF3.1, wheat HBP1b and Arabidopsis aHBP1b proteins. The DNA-binding properties of OBF4 and OBF5 were similar although OBF5 was able to bind simultaneously to both halves of the ocs-element more efficiently than OBF4. This difference in binding to the ocs-element between two closely related proteins from the same species is potentially significant since binding to both halves of the ocs-element is a pre-requisite for in vivo transcriptional activity.

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Year:  1993        PMID: 8252072     DOI: 10.1046/j.1365-313x.1993.04040711.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  30 in total

1.  Expression profile matrix of Arabidopsis transcription factor genes suggests their putative functions in response to environmental stresses.

Authors:  Wenqiong Chen; Nicholas J Provart; Jane Glazebrook; Fumiaki Katagiri; Hur-Song Chang; Thomas Eulgem; Felix Mauch; Sheng Luan; Guangzhou Zou; Steve A Whitham; Paul R Budworth; Yi Tao; Zhiyi Xie; Xi Chen; Steve Lam; Joel A Kreps; Jeffery F Harper; Azzedine Si-Ammour; Brigitte Mauch-Mani; Manfred Heinlein; Kappei Kobayashi; Thomas Hohn; Jeffery L Dangl; Xun Wang; Tong Zhu
Journal:  Plant Cell       Date:  2002-03       Impact factor: 11.277

2.  DNA-binding properties, genomic organization and expression pattern of TGA6, a new member of the TGA family of bZIP transcription factors in Arabidopsis thaliana.

Authors:  C Xiang; Z Miao; E Lam
Journal:  Plant Mol Biol       Date:  1997-06       Impact factor: 4.076

3.  QTL analysis of seed germination and pre-emergence growth at extreme temperatures in Medicago truncatula.

Authors:  Paula Menna Barreto Dias; Sophie Brunel-Muguet; Carolyne Dürr; Thierry Huguet; Didier Demilly; Marie-Helene Wagner; Béatrice Teulat-Merah
Journal:  Theor Appl Genet       Date:  2010-09-29       Impact factor: 5.699

4.  Interactions between distinct types of DNA binding proteins enhance binding to ocs element promoter sequences.

Authors:  B Zhang; W Chen; R C Foley; M Büttner; K B Singh
Journal:  Plant Cell       Date:  1995-12       Impact factor: 11.277

5.  Tobacco TGA factors differ with respect to interaction with NPR1, activation potential and DNA-binding properties.

Authors:  R Niggeweg; C Thurow; R Weigel; U Pfitzner; C Gatz
Journal:  Plant Mol Biol       Date:  2000-03       Impact factor: 4.076

6.  Molecular characterization of AtNAM: a member of the Arabidopsis NAC domain superfamily.

Authors:  Manuel Duval; Tzung-Fu Hsieh; Soo Young Kim; Terry L Thomas
Journal:  Plant Mol Biol       Date:  2002-09       Impact factor: 4.076

7.  Homeodomain leucine zipper proteins bind to the phosphate response domain of the soybean VspB tripartite promoter.

Authors:  Z Tang; A Sadka; D T Morishige; J E Mullet
Journal:  Plant Physiol       Date:  2001-02       Impact factor: 8.340

8.  Binding specificity and tissue-specific expression pattern of the Arabidopsis bZIP transcription factor TGA2.

Authors:  S de Pater; K Pham; J Memelink; J Kijne
Journal:  Mol Gen Genet       Date:  1996-02-05

9.  Effect of the nuclear factors EmBP1 and viviparous1 on the transcription of the Em gene in HeLa nuclear extracts.

Authors:  M A Razik; R S Quatrano
Journal:  Plant Cell       Date:  1997-10       Impact factor: 11.277

10.  ocs element promoter sequences are activated by auxin and salicylic acid in Arabidopsis.

Authors:  B Zhang; K B Singh
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-29       Impact factor: 11.205

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