Literature DB >> 8250233

Determination of metabolites by 1H NMR and GC: analysis for organic osmolytes in crude tissue extracts.

T W Fan1, T D Colmer, A N Lane, R M Higashi.   

Abstract

World-wide salinity and drought problems necessitate the understanding of biological adaptation to water deficit. Osmotic adjustment via organic solutes is a common strategy for organisms to deal with water deficit problems. Numerous water-soluble organic metabolites across several chemical classes are commonly utilized as osmolytes, including betaines, sulfonium and sulfonate compounds, amino acids, carbohydrates, and polyols. To deal with the complexity and variability in osmolyte composition, we have devised an analytical approach that combines high-resolution 1H NMR and GLC to provide both structure identification and quantification of a broad spectrum of compounds. This combined approach also facilitated direct analyses of crude tissue extracts without extensive sample preparation, making it well-suited for a convenient screening of potential osmolytes. The structures of known osmolytes were confirmed from two-dimensional total correlation 1H NMR spectra, which also yielded structural information about unknown compounds. Five each terrestrial plant and marine animal species were examined for 41 metabolites, including osmolyte candidates glycinebetaine, dimethylsulfoniopropionate, taurine, proline, glycine, asparagine, alanine, glutamine, glucose, and sucrose. The osmotic function of glycinebetaine, proline, asparagine, glutamine, glucose, and sucrose was also demonstrated in leaves of Distichlis spicata under different salinity treatments.

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Year:  1993        PMID: 8250233     DOI: 10.1006/abio.1993.1486

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  18 in total

Review 1.  Stable isotope-resolved metabolomics and applications for drug development.

Authors:  Teresa W-M Fan; Pawel K Lorkiewicz; Katherine Sellers; Hunter N B Moseley; Richard M Higashi; Andrew N Lane
Journal:  Pharmacol Ther       Date:  2011-12-23       Impact factor: 12.310

2.  Exploring the temperature-stress metabolome of Arabidopsis.

Authors:  Fatma Kaplan; Joachim Kopka; Dale W Haskell; Wei Zhao; K Cameron Schiller; Nicole Gatzke; Dong Yul Sung; Charles L Guy
Journal:  Plant Physiol       Date:  2004-11-19       Impact factor: 8.340

Review 3.  Diversity, distribution and roles of osmoprotective compounds accumulated in halophytes under abiotic stress.

Authors:  Inès Slama; Chedly Abdelly; Alain Bouchereau; Tim Flowers; Arnould Savouré
Journal:  Ann Bot       Date:  2015-01-05       Impact factor: 4.357

4.  Stable isotope-labeled tracers for metabolic pathway elucidation by GC-MS and FT-MS.

Authors:  Richard M Higashi; Teresa W-M Fan; Pawel K Lorkiewicz; Hunter N B Moseley; Andrew N Lane
Journal:  Methods Mol Biol       Date:  2014

5.  Metabolomics Reveals that Aryl Hydrocarbon Receptor Activation by Environmental Chemicals Induces Systemic Metabolic Dysfunction in Mice.

Authors:  Limin Zhang; Emmanuel Hatzakis; Robert G Nichols; Ruixin Hao; Jared Correll; Philip B Smith; Christopher R Chiaro; Gary H Perdew; Andrew D Patterson
Journal:  Environ Sci Technol       Date:  2015-06-12       Impact factor: 9.028

6.  Tolerance of combined submergence and salinity in the halophytic stem-succulent Tecticornia pergranulata.

Authors:  T D Colmer; H Vos; O Pedersen
Journal:  Ann Bot       Date:  2008-07-25       Impact factor: 4.357

7.  Differential Solute Regulation in Leaf Blades of Various Ages in Salt-Sensitive Wheat and a Salt-Tolerant Wheat x Lophopyrum elongatum (Host) A. Love Amphiploid.

Authors:  T. D. Colmer; E. Epstein; J. Dvorak
Journal:  Plant Physiol       Date:  1995-08       Impact factor: 8.340

8.  Metabolomic investigations of American oysters using H-NMR spectroscopy.

Authors:  Andrey P Tikunov; Christopher B Johnson; Haakil Lee; Michael K Stoskopf; Jeffrey M Macdonald
Journal:  Mar Drugs       Date:  2010-10-08       Impact factor: 5.118

9.  Variable response of three Trifolium repens ecotypes to soil flooding by seawater.

Authors:  Anissia C White; Timothy D Colmer; Greg R Cawthray; Mick E Hanley
Journal:  Ann Bot       Date:  2014-06-18       Impact factor: 4.357

10.  CO2 and O2 dynamics in leaves of aquatic plants with C3 or CAM photosynthesis - application of a novel CO2 microsensor.

Authors:  Ole Pedersen; Timothy D Colmer; Emilio Garcia-Robledo; Niels P Revsbech
Journal:  Ann Bot       Date:  2018-09-24       Impact factor: 4.357

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