Literature DB >> 8241129

Flexibility impaired by mutations revealed the multifunctional roles of the loop in glutathione synthetase.

T Tanaka1, H Yamaguchi, H Kato, T Nishioka, Y Katsube, J Oda.   

Abstract

The loop from Ile-226 to Arg-241 in the glutathione synthetase (GSHase) from Escherichia coli B is rich in glycine and alanine and too flexible to take a fixed conformation [Yamaguchi, H., Kato, H., Hata, Y., Nishioka, T., Kimura, A., Oda, J., & Katsube, Y. (1993) J. Mol. Biol. 229, 1083-1100; Tanaka, T., Kato, H., Nishioka, T., & Oda, J. (1992) Biochemistry 31, 2259-2265]. To restrict the flexibility, three residues in the loop, Pro-227, Gly-229, and Gly-240, were replaced with alanine and valine residues. Variability in conformations of the mutant loops and shifts in the distribution of conformers between the open and closed states were assessed by steady-state kinetics, X-ray crystallographic structure analysis, and proteolysis with arginyl endopeptidase. Mutant enzymes replaced with a valine residue at the basal positions of the loop (P227V, G240V, and P227V/G240V) were identical with the wild-type enzyme in their crystal structures, except the loop region. The mutant loops retained apparent conformational variability, so as to take the open and closed states and to protect the acyl phosphate intermediate from the decomposition uncoupled from glutathione synthesis, but lost the catalytic activity; Kmapp values for glycine and gamma-Glu-Cys were sensitive to the mutations and drastically increased, and the k0app value was fatally reduced in the P227V/G240V mutant enzyme. The present results suggest that adjustability of the loop to the closed state is required for the recognition of the substrates, gamma-Glu-Cys and glycine, and for the chemical interactions with the bound substrates.

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Year:  1993        PMID: 8241129     DOI: 10.1021/bi00097a018

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  7 in total

1.  P-loop flexibility in Na+ channel pores revealed by single- and double-cysteine replacements.

Authors:  R G Tsushima; R A Li; P H Backx
Journal:  J Gen Physiol       Date:  1997-07       Impact factor: 4.086

2.  Analysis of the structure and stability of omega loop A replacements in yeast iso-1-cytochrome c.

Authors:  J S Fetrow; S R Horner; W Oehrl; D L Schaak; T L Boose; R E Burton
Journal:  Protein Sci       Date:  1997-01       Impact factor: 6.725

3.  The role of the glycine triad in human glutathione synthetase.

Authors:  Adriana Dinescu; Teresa R Brown; Sarah Barelier; Thomas R Cundari; Mary E Anderson
Journal:  Biochem Biophys Res Commun       Date:  2010-08-26       Impact factor: 3.575

4.  The pepsin residue glycine-76 contributes to active-site loop flexibility and participates in catalysis.

Authors:  M Okoniewska; T Tanaka; R Y Yada
Journal:  Biochem J       Date:  2000-07-01       Impact factor: 3.857

5.  Identification of a putative flexible loop in Arabidopsis glutathione synthetase.

Authors:  C L Wang; D J Oliver
Journal:  Biochem J       Date:  1997-02-15       Impact factor: 3.857

6.  Hydrogen bond residue positioning in the 599-611 loop of thimet oligopeptidase is required for substrate selection.

Authors:  Lisa A Bruce; Jeffrey A Sigman; Danica Randall; Scott Rodriguez; Michelle M Song; Yi Dai; Donald E Elmore; Amanda Pabon; Marc J Glucksman; Adele J Wolfson
Journal:  FEBS J       Date:  2008-11       Impact factor: 5.542

7.  A common fold for peptide synthetases cleaving ATP to ADP: glutathione synthetase and D-alanine:d-alanine ligase of Escherichia coli.

Authors:  C Fan; P C Moews; Y Shi; C T Walsh; J R Knox
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-14       Impact factor: 11.205

  7 in total

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