Literature DB >> 8240950

Phylogenetic relationships between some members of the genera Deleya, Halomonas, and Halovibrio.

S J Dobson1, T A McMeekin, P D Franzmann.   

Abstract

The genera Halomonas and Deleya, which constitute the family Halomonadaceae, are difficult to differentiate on the basis of phenotypic and chemotaxonomic attributes. DNA-rRNA hybridization studies have indicated that some Halomonas spp. have the same level of relationship to the type species of the genus Deleya as some Deleya spp. A phylogenetic analysis of the 16S rRNA sequences of seven members of the Halomonadaceae indicated that the members of the genera Halomonas and Deleya do not form separate monophyletic subgroups, confirming the lack of any phylogenetic support for retention of these taxa as separate genera. A phylogenetic analysis of the 16S rRNA sequence of Halovibrio variabilis confirmed that this species belongs in the Halomonadaceae. All of the members of the Halomonadaceae examined and Halovibrio variabilis possess a cytosine residue at position 486 (Escherichia coli numbering), which is an extremely rare attribute among the prokaryotes and has been reported in only one other species, Listonella anguillarum. Several other signature characteristics which define this group in the gamma subclass of the Proteobacteria are identified. The Jukes-Cantor distances between members of the family Halomonadaceae, including Halovibrio variabilis, range from 0.086 to 0.000 (the levels of similarity between the 16S rRNA sequences range from 92.6 to 100%). The members of the genera Halomonas, Deleya, and Halovibrio form a monophyletic group and share common chemotaxonomic and phenotypic characteristics. Subgroups containing members of the genera Halomonas, Deleya, and Halovibrio cannot be resolved on the basis of phylogenetic, chemotaxonomic, or phenotypic data. Our data indicate that the members of the genera Halomonas, Deleya, and Halovibrio should be united in a single genus.

Entities:  

Mesh:

Substances:

Year:  1993        PMID: 8240950     DOI: 10.1099/00207713-43-4-665

Source DB:  PubMed          Journal:  Int J Syst Bacteriol        ISSN: 0020-7713


  8 in total

1.  Diversity of thiosulfate-oxidizing bacteria from marine sediments and hydrothermal vents.

Authors:  A Teske; T Brinkhoff; G Muyzer; D P Moser; J Rethmeier; H W Jannasch
Journal:  Appl Environ Microbiol       Date:  2000-08       Impact factor: 4.792

2.  Use of 16S ribosomal DNA for delineation of marine bacterioplankton species.

Authors:  Ake Hagström; Thomas Pommier; Forest Rohwer; Karin Simu; Willem Stolte; Dominika Svensson; Ulla Li Zweifel
Journal:  Appl Environ Microbiol       Date:  2002-07       Impact factor: 4.792

3.  Combining culture-dependent and -independent methodologies for estimation of richness of estuarine bacterioplankton consuming riverine dissolved organic matter.

Authors:  Veljo Kisand; Johan Wikner
Journal:  Appl Environ Microbiol       Date:  2003-06       Impact factor: 4.792

4.  Cel8H, a novel endoglucanase from the halophilic bacterium Halomonas sp. S66-4: molecular cloning, heterogonous expression, and biochemical characterization.

Authors:  Xiaoluo Huang; Zongze Shao; Yuzhi Hong; Ling Lin; Chanjuan Li; Fei Huang; Hui Wang; Ziduo Liu
Journal:  J Microbiol       Date:  2010-06-23       Impact factor: 3.422

Review 5.  Biology of moderately halophilic aerobic bacteria.

Authors:  A Ventosa; J J Nieto; A Oren
Journal:  Microbiol Mol Biol Rev       Date:  1998-06       Impact factor: 11.056

6.  Phylogeny of culturable estuarine bacteria catabolizing riverine organic matter in the northern Baltic Sea.

Authors:  Veljo Kisand; Rocio Cuadros; Johan Wikner
Journal:  Appl Environ Microbiol       Date:  2002-01       Impact factor: 4.792

7.  Biodegradation of cyclic nitramines by tropical marine sediment bacteria.

Authors:  Manish Bhatt; Jian-Shen Zhao; Fanny Monteil-Rivera; Jalal Hawari
Journal:  J Ind Microbiol Biotechnol       Date:  2005-05-25       Impact factor: 3.346

8.  Changes in Cellular States of the Marine Bacterium Deleya aquamarina under Starvation Conditions.

Authors:  F Joux; P Lebaron; M Troussellier
Journal:  Appl Environ Microbiol       Date:  1997-07       Impact factor: 4.792

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.