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Literature DB >> 8230248

Effective population size, genetic diversity, and coalescence time in subdivided populations.

Abstract

A formula for the effective population size for the finite island model of subdivided populations is derived. The formula indicates that the effective size can be substantially greater than the actual number of individuals in the entire population when the migration rate among subpopulations is small. It is shown that the mean nucleotide diversity, coalescence time, and heterozygosity for genes sampled from the entire population can be predicted fairly well from the theory for randomly mating populations if the effective population size for the finite island model is used.

Mesh：

Year: 1993 PMID： 8230248 DOI： 10.1007/bf00175500

Source DB: PubMed Journal: J Mol Evol ISSN： 0022-2844 Impact factor: 2.395

23 in total

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Authors: G A Watterson
Journal: Theor Popul Biol Date: 1975-04 Impact factor: 1.570

2. THE NUMBER OF ALLELES THAT CAN BE MAINTAINED IN A FINITE POPULATION.

Authors: M KIMURA; J F CROW
Journal: Genetics Date: 1964-04 Impact factor: 4.562

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Authors: S WRIGHT
Journal: Ann Eugen Date: 1951-03

4. Genetic variability and effective population size when local extinction and recolonization of subpopulations are frequent.

Authors: T Maruyama; M Kimura
Journal: Proc Natl Acad Sci U S A Date: 1980-11 Impact factor: 11.205

5. F and g statistics in the finite island model.

Authors: N Takahata; M Nei
Journal: Genetics Date: 1984-07 Impact factor: 4.562

6. Genealogy of neutral genes in two partially isolated populations.

Authors: N Takahata; M Slatkin
Journal: Theor Popul Biol Date: 1990-12 Impact factor: 1.570

7. DNA polymorphism in a subdivided population: the expected number of segregating sites in the two-subpopulation model.

Authors: F Tajima
Journal: Genetics Date: 1989-09 Impact factor: 4.562

8. Distribution of gene frequencies in a geographically structured finite population. I. Distribution of neutral genes and of genes with small efect.

Authors: T Maruyama
Journal: Ann Hum Genet Date: 1972-04 Impact factor: 1.670

9. Evolutionary relationship of DNA sequences in finite populations.

Authors: F Tajima
Journal: Genetics Date: 1983-10 Impact factor: 4.562

10. Phylogenetic relationships among Japanese, rhesus, Formosan, and crab-eating monkeys, inferred from restriction-enzyme analysis of mitochondrial DNAs.

Authors: K Hayasaka; S Horai; T Gojobori; T Shotake; K Nozawa; E Matsunaga
Journal: Mol Biol Evol Date: 1988-05 Impact factor: 16.240

38 in total

1. Species and recombination effects on DNA variability in the tomato genus.

Authors: E Baudry; C Kerdelhué; H Innan; W Stephan
Journal: Genetics Date: 2001-08 Impact factor: 4.562

2. Selection in a subdivided population with dominance or local frequency dependence.

Authors: Joshua L Cherry
Journal: Genetics Date: 2003-04 Impact factor: 4.562

3. A diffusion approximation for selection and drift in a subdivided population.

Authors: Joshua L Cherry; John Wakeley
Journal: Genetics Date: 2003-01 Impact factor: 4.562

4. On the importance of being structured: instantaneous coalescence rates and human evolution--lessons for ancestral population size inference?

Authors: O Mazet; W Rodríguez; S Grusea; S Boitard; L Chikhi
Journal: Heredity (Edinb) Date: 2015-12-09 Impact factor: 3.821

10. Phylogeographic patterns of mtDNA variation revealed multiple glacial refugia for the frog species Feirana taihangnica endemic to the Qinling Mountains.

Authors: Bin Wang; Jianping Jiang; Feng Xie; Cheng Li
Journal: J Mol Evol Date: 2013-02-05 Impact factor: 2.395