Literature DB >> 8227039

Purification and characterization of an enzyme involved in oxidative carbon-carbon bond cleavage reactions in the methionine salvage pathway of Klebsiella pneumoniae.

R W Myers1, J W Wray, S Fish, R H Abeles.   

Abstract

The 5-methylthio-D-ribose moiety of 5'-(methylthio)-adenosine is converted to methionine in a wide variety of organisms. 2,3-Diketo-5-methylthio-1-phosphopentane is an advanced intermediate in the methionine recycling pathway present in the Gram-negative bacterium Klebsiella pneumoniae. This unusual metabolite is oxidatively cleaved to yield formate (from C-1), 2-keto-4-methylthiobutyrate (the transamination product of methionine), and 3-methylthiopropionate. To further characterize this oxidative conversion, the desthio analog of the naturally occurring diketone, namely 2,3-diketo-1-phosphohexane I, was synthesized. If the metabolism of I is analogous to that of 2,3-diketo-5-methylthio-1-phosphopentane it should be converted to formate, 2-ketopentanoate, and butyrate. An enzyme (E-1), which mediates the oxidative conversion of I to formate and 2-ketopentanoate, was isolated from extracts of K. pneumoniae. E-1 was purified 100-fold to homogeneity in 10% yield. The native enzyme is a monomeric protein of M(r) 27,000. The activity of E-1 requires magnesium ion as a cofactor. No other prosthetic groups were detected. Incubation of the enzyme with I, under anaerobic conditions, led to the discovery of two intermediates. These species have been identified by 1H and 13C NMR, UV-visible spectroscopy, and model chemistry studies as 2-hydroxy-3-keto-1-phospho-1-hexene II, generated by enolization of I; and 1,2-dihydroxy-3-keto-1-hexene III, generated by enzymatic dephosphorylation of II. Intermediates II and III are released from the active site of the enzyme; III accumulates under anaerobic conditions. Under aerobic conditions, III is non-enzymically oxidized to 2-ketopentanoate, formate, and other products. Compound II was also generated by heating I at pH 7.5 for 7 min. Action of alkaline phosphatase on II produces III.

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Year:  1993        PMID: 8227039

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  20 in total

1.  Affinity purification of 5-methylthioribose kinase and 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase from Klebsiella pneumoniae [corrected].

Authors:  K A Cornell; R W Winter; P A Tower; M K Riscoe
Journal:  Biochem J       Date:  1996-07-01       Impact factor: 3.857

2.  Methionine regeneration and aspartate aminotransferase in parasitic protozoa.

Authors:  L C Berger; J Wilson; P Wood; B J Berger
Journal:  J Bacteriol       Date:  2001-08       Impact factor: 3.490

3.  (1)H, (13)C and (15)N chemical shift assignments of an enolase-phosphatase, E1, from Klebsiella oxytoca.

Authors:  Milka Kostic; Thomas C Pochapsky
Journal:  J Biomol NMR       Date:  2004-11       Impact factor: 2.835

Review 4.  The Metal Drives the Chemistry: Dual Functions of Acireductone Dioxygenase.

Authors:  Aditi R Deshpande; Thomas C Pochapsky; Dagmar Ringe
Journal:  Chem Rev       Date:  2017-07-21       Impact factor: 60.622

5.  Dual chemistry catalyzed by human acireductone dioxygenase.

Authors:  Aditi R Deshpande; Thomas C Pochapsky; Gregory A Petsko; Dagmar Ringe
Journal:  Protein Eng Des Sel       Date:  2017-03-01       Impact factor: 1.650

6.  Novel pathway for assimilation of dimethylsulphoniopropionate widespread in marine bacteria.

Authors:  Chris R Reisch; Melissa J Stoudemayer; Vanessa A Varaljay; I Jonathan Amster; Mary Ann Moran; William B Whitman
Journal:  Nature       Date:  2011-05-12       Impact factor: 49.962

7.  A tris (2-carboxyethyl) phosphine (TCEP) related cleavage on cysteine-containing proteins.

Authors:  Peiran Liu; Brian W O'Mara; Bethanne M Warrack; Wei Wu; Yunping Huang; Yihong Zhang; Rulin Zhao; Mei Lin; Michael S Ackerman; Peter K Hocknell; Guodong Chen; Li Tao; Siegfried Rieble; Jack Wang; David B Wang-Iverson; Adrienne A Tymiak; Michael J Grace; Reb J Russell
Journal:  J Am Soc Mass Spectrom       Date:  2010-01-28       Impact factor: 3.109

8.  Metal-Dependent Function of a Mammalian Acireductone Dioxygenase.

Authors:  Aditi R Deshpande; Karina Wagenpfeil; Thomas C Pochapsky; Gregory A Petsko; Dagmar Ringe
Journal:  Biochemistry       Date:  2016-02-24       Impact factor: 3.162

9.  Characterization of chromosomal regions conserved in Yersinia pseudotuberculosis and lost by Yersinia pestis.

Authors:  Flavie Pouillot; Corinne Fayolle; Elisabeth Carniel
Journal:  Infect Immun       Date:  2008-08-04       Impact factor: 3.441

10.  Characterization of metal binding in the active sites of acireductone dioxygenase isoforms from Klebsiella ATCC 8724.

Authors:  Sergio C Chai; Tingting Ju; Marina Dang; Rachel Beaulieu Goldsmith; Michael J Maroney; Thomas C Pochapsky
Journal:  Biochemistry       Date:  2008-02-01       Impact factor: 3.162

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