Literature DB >> 8220445

A versatile system for detecting transposition in Arabidopsis.

N V Fedoroff1, D L Smith.   

Abstract

The maize transposable element Activator (Ac) has been shown to be active in a number of dicots, including Arabidopsis thaliana, whose small genome and short generation time have favored its wide adoption as a model organism for molecular genetic approaches to plant physiology and development. Using the Ac element and several bacterial and plant marker genes, we have devised a versatile system for identifying plants in which a transposon has excised and reinserted elsewhere in the genome. The transposons have been designed to facilitate the identification of insertions downstream of promoters and in the vicinity of enhancers by the inclusion of a beta-glucuronidase (GUS) gene either lacking a promoter or having a minimal promoter sequence. The system permits the transposon and the source of transposase to be maintained either stably in separate plants or in the same plant. Plants in which transposition is occurring can be identified by the frequent somatic activation of the GUS gene. The herbicide chlorsulfuron is used as a selective agent to identify progeny plants in which the transposon has excised from its original insertion site within a chlorsulfuron-resistant acetolactate synthase gene. Additional selectable markers permit the identification of plants containing a transposed element, but lacking transposase. Here we describe our initial characterization of the system and demonstrate its reliability and efficiency in identifying plants with transposed elements.

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Year:  1993        PMID: 8220445     DOI: 10.1111/j.1365-313x.1993.tb00178.x

Source DB:  PubMed          Journal:  Plant J        ISSN: 0960-7412            Impact factor:   6.417


  38 in total

1.  Analysis of extrachromosomal Ac/Ds transposable elements.

Authors:  V Gorbunova; A A Levy
Journal:  Genetics       Date:  2000-05       Impact factor: 4.562

2.  Genetic ablation of root cap cells in Arabidopsis.

Authors:  R Tsugeki; N V Fedoroff
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

Review 3.  Gene traps: tools for plant development and genomics.

Authors:  P S Springer
Journal:  Plant Cell       Date:  2000-07       Impact factor: 11.277

4.  Screening insertion libraries for mutations in many genes simultaneously using DNA microarrays.

Authors:  R Mahalingam; N Fedoroff
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

5.  Transpositional behaviour of an Ac/Ds system for reverse genetics in rice.

Authors:  R Greco; P B F Ouwerkerk; R J De Kam; C Sallaud; C Favalli; L Colombo; E Guiderdoni; A H Meijer; J H C Hoge Dagger; A Pereira
Journal:  Theor Appl Genet       Date:  2003-09-25       Impact factor: 5.699

6.  Resources for targeted insertional and deletional mutagenesis in Arabidopsis.

Authors:  Sen Zhang; Surabhi Raina; Hong Li; Jun Li; Ewa Dec; Hong Ma; Hai Huang; Nina V Fedoroff
Journal:  Plant Mol Biol       Date:  2003-09       Impact factor: 4.076

7.  Seedling lethality in Nicotiana plumbaginifolia conferred by Ds transposable element insertion into a plant-specific gene.

Authors:  Amel Majira; Monique Domin; Olivier Grandjean; Krystyna Gofron; Nicole Houba-Hérin
Journal:  Plant Mol Biol       Date:  2002-10       Impact factor: 4.076

8.  A new resource of locally transposed Dissociation elements for screening gene-knockout lines in silico on the Arabidopsis genome.

Authors:  Takuya Ito; Reiko Motohashi; Takashi Kuromori; Saho Mizukado; Tetsuya Sakurai; Hiroko Kanahara; Motoaki Seki; Kazuo Shinozaki
Journal:  Plant Physiol       Date:  2002-08       Impact factor: 8.340

9.  Establishment of an enhancer trap system with Ds and GUS for functional genomics in rice.

Authors:  Y Ito; M Eiguchi; N Kurata
Journal:  Mol Genet Genomics       Date:  2004-06-18       Impact factor: 3.291

10.  Transcription and somatic transposition of the maize En/Spm transposon system in rice.

Authors:  R Greco; P B F Ouwerkerk; A J C Taal; C Sallaud; E Guiderdoni; A H Meijer; J H C Hoge; A Pereira
Journal:  Mol Genet Genomics       Date:  2003-11-14       Impact factor: 3.291

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