Literature DB >> 8200734

Conformation of the oxalamide group in retro-bispeptides. Three crystal structures.

I L Karle1, D Ranganathan, K Shah, N K Vaish.   

Abstract

We have determined the structures of a range of peptides having the oxalamide (-NH-CO-CO-NH-) unit located at their center. The oxalamide group has the trans conformation in two retropeptides and an approximately orthogonal conformation in the peptide with Pro residues. Torsional angles about the CO-CO bond are 180 degrees in MeO-Aib-CO-CO-Aib-OMe (1), 175 degrees in MeO-L-Leu-CO-CO-L-Leu-OMe (2), and -108 and -106 degrees for the two independent molecules in the crystal of MeO-L-Pro-CO-CO-L-Pro-OMe (3), owing to steric hindrance between CO and the pyrolidine ring. Crystal data are: (1) C12H20N2O6, triclinic, space group P1, a = 6.190(1), b = 10.044(2), c = 11.989(2) A, alpha = 86.13(12), beta = 83.13(2), gamma = 80.16(2) degrees, R = 0.057 for 1646 observed reflections [magnitude of Fo > 3 sigma (magnitude of Fo)]; (2) C16H28N2O6, tetragonal, space group P4(1), a = b = 11.121(3), c = 15.775(6) A, R = 0.058 for 1216 observed reflections [magnitude of Fo > 3 sigma (magnitude of Fo)]; (3) C14H20N2O6, monoclinic space group P2(1), a = 9.556(2), b = 17.864(3), c = 9.618(2) A, beta = 104.35(1) degree; R = 0.051 for 2100 observed reflections [magnitude of Fo > 3 sigma (magnitude of Fo)].

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Year:  1994        PMID: 8200734     DOI: 10.1111/j.1399-3011.1994.tb00517.x

Source DB:  PubMed          Journal:  Int J Pept Protein Res        ISSN: 0367-8377


  2 in total

1.  The Metal Effect on Self-Assembling of Oxalamide Gelators Explored by Mass Spectrometry and DFT Calculations.

Authors:  Dario Dabić; Lidija Brkljačić; Tana Tandarić; Mladen Žinić; Robert Vianello; Leo Frkanec; Renata Kobetić
Journal:  J Am Soc Mass Spectrom       Date:  2017-10-30       Impact factor: 3.109

2.  Oxalyl retro-peptide gelators. Synthesis, gelation properties and stereochemical effects.

Authors:  Janja Makarević; Milan Jokić; Leo Frkanec; Vesna Caplar; Nataša Sijaković Vujičić; Mladen Zinić
Journal:  Beilstein J Org Chem       Date:  2010-10-04       Impact factor: 2.883

  2 in total

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