Literature DB >> 8193156

Sequence analysis of the agaB gene encoding a new beta-agarase from Vibrio sp. strain JT0107.

Y Sugano1, T Matsumoto, M Noma.   

Abstract

An agarase gene (agaB) was cloned from genomic DNA of Vibrio sp. strain JT0107. Analysis of the 3200 nucleotide sequence just before the agarase 0107 gene (agaA) which existed in genomic DNA of Vibrio sp. strain JT0107 revealed a putative single open reading frame coding for 955 amino acids. Comparison of the deduced amino acid sequence of AgaB to that of agarase 0107 revealed the existence of partially highly homologous regions. A part of this gene was expressed in Escherichia coli to yield a protein with agarase activity. This is the first report of evidence by genetic analysis that at least two different kinds of agarases exist in strain JT0107.

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Year:  1994        PMID： 8193156     DOI： 10.1016/0167-4781(94)90109-0

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN： 0006-3002


  15 in total

1.  Sequence analysis of a 101-kilobase plasmid required for agar degradation by a Microscilla isolate.

Authors:  Z Zhong; A Toukdarian; D Helinski; V Knauf; S Sykes; J E Wilkinson; C O'Bryne; T Shea; C DeLoughery; R Caspi
Journal:  Appl Environ Microbiol       Date:  2001-12       Impact factor: 4.792

2.  Cloning, characterization, and molecular application of a beta-agarase gene from Vibrio sp. strain V134.

Authors:  Wei-wei Zhang; Li Sun
Journal:  Appl Environ Microbiol       Date:  2007-03-02       Impact factor: 4.792

3.  Gene cloning, expression and characterization of a neoagarotetraose-producing β-agarase from the marine bacterium Agarivorans sp. HZ105.

Authors:  Bokun Lin; Guoyong Lu; Yandan Zheng; Wei Xie; Shengkang Li; Zhong Hu
Journal:  World J Microbiol Biotechnol       Date:  2011-12-27       Impact factor: 3.312

4.  Identification and characterization of a novel β-galactosidase from Victivallis vadensis ATCC BAA-548, an anaerobic fecal bacterium.

Authors:  Uyangaa Temuujin; Won-Jae Chi; Jae-Sun Park; Yong-Keun Chang; Jae Yang Song; Soon-Kwang Hong
Journal:  J Microbiol       Date:  2012-12-30       Impact factor: 3.422

5.  Purification and characterization of a novel enzyme, alpha-neoagarooligosaccharide hydrolase (alpha-NAOS hydrolase), from a marine bacterium, Vibrio sp. strain JT0107.

Authors:  Y Sugano; H Kodama; I Terada; Y Yamazaki; M Noma
Journal:  J Bacteriol       Date:  1994-11       Impact factor: 3.490

6.  Identification of a marine agarolytic pseudoalteromonas isolate and characterization of its extracellular agarase

Authors: 
Journal:  Appl Environ Microbiol       Date:  1998-11       Impact factor: 4.792

Review 7.  Agarase: review of major sources, categories, purification method, enzyme characteristics and applications.

Authors:  Xiao Ting Fu; Sang Moo Kim
Journal:  Mar Drugs       Date:  2010-01-26       Impact factor: 5.118

Review 8.  Research and application of marine microbial enzymes: status and prospects.

Authors:  Chen Zhang; Se-Kwon Kim
Journal:  Mar Drugs       Date:  2010-06-23       Impact factor: 5.118

Review 9.  Vibrio fluvialis: an unusual enteric pathogen of increasing public health concern.

Authors:  Etinosa O Igbinosa; Anthony I Okoh
Journal:  Int J Environ Res Public Health       Date:  2010-10-12       Impact factor: 3.390

10.  The endo-beta-agarases AgaA and AgaB from the marine bacterium Zobellia galactanivorans: two paralogue enzymes with different molecular organizations and catalytic behaviours.

Authors:  Murielle Jam; Didier Flament; Julie Allouch; Philippe Potin; Laurent Thion; Bernard Kloareg; Mirjam Czjzek; William Helbert; Gurvan Michel; Tristan Barbeyron
Journal:  Biochem J       Date:  2005-02-01       Impact factor: 3.857
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