Literature DB >> 8181000

The effect of variation of substitution on the solution conformation of heparin: a spectroscopic and molecular modelling study.

B Mulloy1, M J Forster, C Jones, A F Drake, E A Johnson, D B Davies.   

Abstract

The effect of variations in substitution on the conformation of iduronate-containing sequences in heparin and heparan sulphate has been studied using a series of chemically-modified heparins in which substitution with O- and N-sulphate and N-acetyl substituents has been systematically altered. Monosaccharides corresponding to residues in these modified heparins have also been investigated. The conformations of the glycosidic linkages in O- and N-desulphated re-N-acetylated heparin, O-desulphated re-N-sulphated heparin, and 6-O-desulphated re-N-sulphated heparin have been compared with those of N-desulphated re-N-acetylated heparin and of heparin itself, which have been compared with those of N-desulphated re-N-acetylated heparin and of heparin itself, which have previously been reported [B. Mulloy, M.J. Forster, C. Jones, and D.B. Davies, Biochem. J., 293 (1993) 849-858]. The overall conformation of all the polysaccharides is shown to be similar, regardless of substitution pattern. The conformational equilibrium of the pyranose ring of iduronic acid residues in the polysaccharides has been monitored by the use of 13C NMR chemical shift temperature coefficients, and shown to be similar for all the modified heparins with the exception of N-desulphated re-N-acetylated heparin. Circular dichroism spectra of all the polysaccharides are reported, and their variations attributed to differences in the proportions of pyranose ring forms in the iduronate conformational equilibrium.

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Year:  1994        PMID: 8181000     DOI: 10.1016/s0008-6215(00)90968-6

Source DB:  PubMed          Journal:  Carbohydr Res        ISSN: 0008-6215            Impact factor:   2.104


  20 in total

1.  Crystal structure of amyloid precursor-like protein 1 and heparin complex suggests a dual role of heparin in E2 dimerization.

Authors:  Yi Xue; Sangwon Lee; Ya Ha
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-19       Impact factor: 11.205

2.  Preparation, separation, and conformational analysis of differentially sulfated heparin octasaccharide isomers using ion mobility mass spectrometry.

Authors:  Youjin Seo; Armann Andaya; Julie A Leary
Journal:  Anal Chem       Date:  2012-02-14       Impact factor: 6.986

3.  Finding a needle in a haystack: development of a combinatorial virtual screening approach for identifying high specificity heparin/heparan sulfate sequence(s).

Authors:  Arjun Raghuraman; Philip D Mosier; Umesh R Desai
Journal:  J Med Chem       Date:  2006-06-15       Impact factor: 7.446

4.  Manipulation of hydrogel assembly and growth factor delivery via the use of peptide-polysaccharide interactions.

Authors:  Le Zhang; Eric M Furst; Kristi L Kiick
Journal:  J Control Release       Date:  2006-06-10       Impact factor: 9.776

Review 5.  High-field NMR as a technique for the determination of polysaccharide structures.

Authors:  B Mulloy
Journal:  Mol Biotechnol       Date:  1996-12       Impact factor: 2.695

6.  Perspective on computational simulations of glycosaminoglycans.

Authors:  Balaji Nagarajan; Nehru Viji Sankaranarayanan; Umesh R Desai
Journal:  Wiley Interdiscip Rev Comput Mol Sci       Date:  2018-09-10

7.  Extension and validation of the GLYCAM force field parameters for modeling glycosaminoglycans.

Authors:  Arunima Singh; Matthew B Tessier; Kari Pederson; Xiaocong Wang; Andre P Venot; Geert-Jan Boons; James H Prestegard; Robert J Woods
Journal:  Can J Chem       Date:  2016-02-09       Impact factor: 1.118

8.  Conformational analysis of a dermatan sulfate-derived tetrasaccharide by NMR, molecular modeling, and residual dipolar couplings.

Authors:  Alba Silipo; Zhenqing Zhang; F Javier Cañada; Antonio Molinaro; Robert J Linhardt; Jesús Jiménez-Barbero
Journal:  Chembiochem       Date:  2008-01-25       Impact factor: 3.164

9.  The structural plasticity of heparan sulfate NA-domains and hence their role in mediating multivalent interactions is confirmed by high-accuracy (15)N-NMR relaxation studies.

Authors:  Mehdi Mobli; Mathias Nilsson; Andrew Almond
Journal:  Glycoconj J       Date:  2007-12-13       Impact factor: 2.916

10.  Tilorone-induced lysosomal lesions: the bisbasic character of the drug is essential for its high potency to cause storage of sulphated glycosaminoglycans.

Authors:  J Fischer; L Hein; R Lüllmann-Rauch; B von Witzendorff
Journal:  Biochem J       Date:  1996-04-15       Impact factor: 3.857

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