Literature DB >> 8180734

Screening techniques for detecting allelic variation in DNA sequences.

E P Lessa1, G Applebaum.   

Abstract

This article reviews four 'DNA screening techniques', namely heteroduplex analysis, single-strand conformational polymorphism (SSCP), denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) as tools for the study of allelic variation in natural populations. The resolving power, advantages, and limitations of each technique are discussed and compared. We also provide some criteria for choosing among techniques and illustrate some practical issues with examples taken primarily from our own laboratory experience.

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Year:  1993        PMID: 8180734     DOI: 10.1111/j.1365-294x.1993.tb00006.x

Source DB:  PubMed          Journal:  Mol Ecol        ISSN: 0962-1083            Impact factor:   6.185


  16 in total

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5.  Estimating long-term mating systems using DNA sequences.

Authors:  B G Milligan
Journal:  Genetics       Date:  1996-02       Impact factor: 4.562

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Authors:  E A Hadly; M H Kohn; J A Leonard; R K Wayne
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8.  Rapid evolution of a sexual reproduction gene in centric diatoms of the genus Thalassiosira.

Authors:  E V Armbrust; H M Galindo
Journal:  Appl Environ Microbiol       Date:  2001-08       Impact factor: 4.792

9.  Phylogenetic relationships of Thiomicrospira species and their identification in deep-sea hydrothermal vent samples by denaturing gradient gel electrophoresis of 16S rDNA fragments.

Authors:  G Muyzer; A Teske; C O Wirsen; H W Jannasch
Journal:  Arch Microbiol       Date:  1995-09       Impact factor: 2.552

10.  Diverse MHC IIB allele repertoire increases parasite resistance and body condition in the Long-tailed giant rat (Leopoldamys sabanus).

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Journal:  BMC Evol Biol       Date:  2009-11-23       Impact factor: 3.260

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