Literature DB >> 8173513

Amplification of DNA from whole blood.

J Burckhardt1.   

Abstract

A method is described for the amplification by PCR of human chromosomal DNA sequences from whole blood samples. Various amounts of blood samples, with either EDTA, citrate, or heparin used as the anticoagulant, have been used to determine optimal PCR conditions for each type of sample. Up to 80% (vol/vol) of whole blood sample is tolerated in PCR with Taq polymerase. Amplification from whole blood requires the optimization of salt (K+ and Mg++) according to sample volume and type of anticoagulant used. Pretreatment of fresh blood samples to lyse the leukocytes is required for EDTA-treated blood samples and is beneficent in PCR with heparin- and citrate-treated blood samples to obtain maximal amplicon amounts. A satisfactory method of pretreating samples is freeze/thawing. In addition, EDTA-treated blood samples require a heat treatment before PCR for maximal amplicon synthesis. It appears that purification of the DNA is not necessary for any of the whole blood samples analyzed by PCR. Results of amplification reactions from unpurified hepatitis B virus (HBV) sequences of whole sera samples are shown also.

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Year:  1994        PMID: 8173513     DOI: 10.1101/gr.3.4.239

Source DB:  PubMed          Journal:  PCR Methods Appl        ISSN: 1054-9803


  10 in total

1.  Sequential DEXAS: a method for obtaining DNA sequences from genomic DNA and blood in one reaction.

Authors:  Michael Motz; Gregor Sagner; Svante Pääbo; Christian Kilger
Journal:  Nucleic Acids Res       Date:  2003-10-15       Impact factor: 16.971

2.  Detecting HbE Gene Using DNA Extracted from Urine Sediments by Chelex-plus-Heating Technique.

Authors:  Areerat Pankham; Thanusak Tatu
Journal:  J Biomol Tech       Date:  2020-09

3.  Whole blood samples for faster real-time PCR analysis of thrombophilic mutations in SARS-CoV-2 virus positive patients.

Authors:  M Beránek; V Koblížek; P Dulíček; J Hegerová; V Palička
Journal:  Physiol Res       Date:  2022-05-26       Impact factor: 2.139

4.  Direct DNA amplification from crude clinical samples using a PCR enhancer cocktail and novel mutants of Taq.

Authors:  Zhian Zhang; Milko B Kermekchiev; Wayne M Barnes
Journal:  J Mol Diagn       Date:  2010-01-14       Impact factor: 5.568

5.  Designing, optimization, and validation of whole blood direct T-ARMS PCR for precise and rapid genotyping of complex vertebral malformation in cattle.

Authors:  R R Alyethodi; U Singh; S Kumar; R Alex; G S Sengar; T V Raja; R Deb; B Prakash
Journal:  BMC Biotechnol       Date:  2021-05-22       Impact factor: 2.563

6.  Rapid microbial sample preparation from blood using a novel concentration device.

Authors:  Anna K Boardman; Jennifer Campbell; Holger Wirz; Andre Sharon; Alexis F Sauer-Budge
Journal:  PLoS One       Date:  2015-02-12       Impact factor: 3.240

7.  Inhibition mechanisms of hemoglobin, immunoglobulin G, and whole blood in digital and real-time PCR.

Authors:  Maja Sidstedt; Johannes Hedman; Erica L Romsos; Leticia Waitara; Lars Wadsö; Carolyn R Steffen; Peter M Vallone; Peter Rådström
Journal:  Anal Bioanal Chem       Date:  2018-03-05       Impact factor: 4.142

8.  Direct DNA and RNA detection from large volumes of whole human blood.

Authors:  Dongyang Cai; Ole Behrmann; Frank Hufert; Gregory Dame; Gerald Urban
Journal:  Sci Rep       Date:  2018-02-21       Impact factor: 4.379

Review 9.  Advances in Directly Amplifying Nucleic Acids from Complex Samples.

Authors:  Faye M Walker; Kuangwen Hsieh
Journal:  Biosensors (Basel)       Date:  2019-09-30

10.  Direct buffer composition of blood pre-process for nucleic acid based diagnostics.

Authors:  YeJi Kim; Won-Nyoung Lee; Hyun Jin Yoo; Changyoon Baek; Junhong Min
Journal:  Biochip J       Date:  2017-12-12       Impact factor: 3.494

  10 in total

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