Literature DB >> 8171335

Direct observation of tube-like motion of a single polymer chain.

T T Perkins1, D E Smith, S Chu.   

Abstract

Tube-like motion of a single, fluorescently labeled molecule of DNA in an entangled solution of unlabeled lambda-phage DNA molecules was observed by fluorescence microscopy. One end of a 16- to 100-micrometer-long DNA was attached to a 1-micrometer bead and moved with optical tweezers. The molecule was stretched into various conformations having bends, kinks, and loops. As the polymer relaxed, it closely followed a path defined by its initial contour. The relaxation time of the disturbance caused by the bead was roughly 1 second, whereas tube-like motion in small loops persisted for longer than 2 minutes. Tube deformation, constraint release, and excess chain segment diffusion were also observed. These observations provide direct evidence for several key assumptions in the reptation model developed by de Gennes, Edwards, and Doi.

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Year:  1994        PMID: 8171335     DOI: 10.1126/science.8171335

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  56 in total

1.  Free energy reconstruction from nonequilibrium single-molecule pulling experiments.

Authors:  G Hummer; A Szabo
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-27       Impact factor: 11.205

2.  Single chain spectroscopy of conformational dependence of conjugated polymer photophysics.

Authors:  T Huser; M Yan; L J Rothberg
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-10       Impact factor: 11.205

3.  Behavior of DNA fibers stretched by precise meniscus motion control.

Authors:  K Otobe; T Ohtani
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

4.  Fluid mechanics of DNA double-strand filter elution.

Authors:  George Rudinger; Ed Robert Blazek
Journal:  Biophys J       Date:  2002-01       Impact factor: 4.033

5.  Discrimination among individual Watson-Crick base pairs at the termini of single DNA hairpin molecules.

Authors:  Wenonah A Vercoutere; Stephen Winters-Hilt; Veronica S DeGuzman; David Deamer; Sam E Ridino; Joseph T Rodgers; Hugh E Olsen; Andre Marziali; Mark Akeson
Journal:  Nucleic Acids Res       Date:  2003-02-15       Impact factor: 16.971

6.  Stretching DNA with optical tweezers.

Authors:  M D Wang; H Yin; R Landick; J Gelles; S M Block
Journal:  Biophys J       Date:  1997-03       Impact factor: 4.033

7.  Electrokinetic stretching of tethered DNA.

Authors:  Sean Ferree; Harvey W Blanch
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

8.  Fluctuation modes of nanoconfined DNA.

Authors:  Alena Karpusenko; Joshua H Carpenter; Chunda Zhou; Shuang Fang Lim; Junhan Pan; Robert Riehn
Journal:  J Appl Phys       Date:  2012-01-17       Impact factor: 2.546

9.  Quantitative tube model for semiflexible polymer solutions.

Authors:  H Hinsch; J Wilhelm; E Frey
Journal:  Eur Phys J E Soft Matter       Date:  2007-09-03       Impact factor: 1.890

10.  Evidence for localized cell heating induced by infrared optical tweezers.

Authors:  Y Liu; D K Cheng; G J Sonek; M W Berns; C F Chapman; B J Tromberg
Journal:  Biophys J       Date:  1995-05       Impact factor: 4.033

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