Literature DB >> 8169200

Transcriptional induction kinetics from the promoters of the catabolic pathways of TOL plasmid pWW0 of Pseudomonas putida for metabolism of aromatics.

S Marqués1, A Holtel, K N Timmis, J L Ramos.   

Abstract

We determined, under several growth conditions, the kinetics of mRNA synthesis from the four Pseudomonas putida pWW0 plasmid promoters involved in degradation of xylenes and methylbenzyl alcohols via toluates. Transcription by XylS of the meta-cleavage pathway operon promoter (Pm) for the metabolism of alkylbenzoates was stimulated immediately after the addition of an effector, both in Luria-Bertani (LB) medium and in minimal medium. Activation of the sigma 54-dependent upper-pathway operon promoter (Pu) and the xylS gene promoter (Ps) by effector-activated XylR was dependent on the growth medium used: on minimal medium, activation of transcription from Pu and Ps occurred immediately after the addition of a XylR effector; in contrast, activation appeared only after several hours when cells were growing on LB medium. When Pm was induced through the physiological overexpression of XylS, mediated by XylR when this regulator was activated by upper-pathway effectors, the kinetics of transcription from Pm was similar to that of Pu and Ps: maximum values were reached after delays of several hours in rich medium and after several minutes in minimal medium. The delay in the induction of transcription of sigma 54-dependent promoters reflects catabolite inhibition exerted by LB components, since the addition of yeast extracts, Casamino Acids, or several combinations of amino acids dramatically inhibited the synthesis of XylR-controlled sigma 54-dependent promoters. Expression from xylR gene tandem promoters occurred independently of the growth medium used.

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Year:  1994        PMID: 8169200      PMCID: PMC205388          DOI: 10.1128/jb.176.9.2517-2524.1994

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  30 in total

1.  A general system to integrate lacZ fusions into the chromosomes of gram-negative eubacteria: regulation of the Pm promoter of the TOL plasmid studied with all controlling elements in monocopy.

Authors:  B Kessler; V de Lorenzo; K N Timmis
Journal:  Mol Gen Genet       Date:  1992-05

2.  Upstream binding sequences of the XylR activator protein and integration host factor in the xylS gene promoter region of the Pseudomonas TOL plasmid.

Authors:  A Holtel; K N Timmis; J L Ramos
Journal:  Nucleic Acids Res       Date:  1992-04-11       Impact factor: 16.971

3.  Early and late responses of TOL promoters to pathway inducers: identification of postexponential promoters in Pseudomonas putida with lacZ-tet bicistronic reporters.

Authors:  V de Lorenzo; I Cases; M Herrero; K N Timmis
Journal:  J Bacteriol       Date:  1993-11       Impact factor: 3.490

4.  Growth-phase-dependent expression of the Pseudomonas putida TOL plasmid pWW0 catabolic genes.

Authors:  N Hugouvieux-Cotte-Pattat; T Köhler; M Rekik; S Harayama
Journal:  J Bacteriol       Date:  1990-12       Impact factor: 3.490

5.  Upstream regulatory sequence for transcriptional activator XylR in the first operon of xylene metabolism on the TOL plasmid.

Authors:  S Inouye; M Gomada; U M Sangodkar; A Nakazawa; T Nakazawa
Journal:  J Mol Biol       Date:  1990-11-20       Impact factor: 5.469

6.  The meta cleavage operon of TOL degradative plasmid pWW0 comprises 13 genes.

Authors:  S Harayama; M Rekik
Journal:  Mol Gen Genet       Date:  1990-03

7.  Activation of the Pseudomonas TOL plasmid upper pathway operon. Identification of binding sites for the positive regulator XylR and for integration host factor protein.

Authors:  M A Abril; M Buck; J L Ramos
Journal:  J Biol Chem       Date:  1991-08-25       Impact factor: 5.157

8.  Regulator and enzyme specificities of the TOL plasmid-encoded upper pathway for degradation of aromatic hydrocarbons and expansion of the substrate range of the pathway.

Authors:  M A Abril; C Michan; K N Timmis; J L Ramos
Journal:  J Bacteriol       Date:  1989-12       Impact factor: 3.490

9.  Analysis of the mRNA structure of the Pseudomonas putida TOL meta fission pathway operon around the transcription initiation point, the xylTE and the xylFJ regions.

Authors:  S Marqués; J L Ramos; K N Timmis
Journal:  Biochim Biophys Acta       Date:  1993-11-16

10.  An upstream XylR- and IHF-induced nucleoprotein complex regulates the sigma 54-dependent Pu promoter of TOL plasmid.

Authors:  V de Lorenzo; M Herrero; M Metzke; K N Timmis
Journal:  EMBO J       Date:  1991-05       Impact factor: 11.598

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  37 in total

Review 1.  The black cat/white cat principle of signal integration in bacterial promoters.

Authors:  I Cases; V de Lorenzo
Journal:  EMBO J       Date:  2001-01-15       Impact factor: 11.598

2.  In vivo and in vitro effects of (p)ppGpp on the sigma(54) promoter Pu of the TOL plasmid of Pseudomonas putida.

Authors:  M Carmona; M J Rodríguez; O Martínez-Costa; V De Lorenzo
Journal:  J Bacteriol       Date:  2000-09       Impact factor: 3.490

Review 3.  The bacterial enhancer-dependent sigma(54) (sigma(N)) transcription factor.

Authors:  M Buck; M T Gallegos; D J Studholme; Y Guo; J D Gralla
Journal:  J Bacteriol       Date:  2000-08       Impact factor: 3.490

4.  Transcriptional organization of the Pseudomonas putida tol-oprL genes.

Authors:  María A Llamas; Juan L Ramos; José J Rodríguez-Herva
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

5.  The Crc global regulator inhibits the Pseudomonas putida pWW0 toluene/xylene assimilation pathway by repressing the translation of regulatory and structural genes.

Authors:  Renata Moreno; Pilar Fonseca; Fernando Rojo
Journal:  J Biol Chem       Date:  2010-06-07       Impact factor: 5.157

6.  Role of the ptsN gene product in catabolite repression of the Pseudomonas putida TOL toluene degradation pathway in chemostat cultures.

Authors:  Isabel Aranda-Olmedo; Patricia Marín; Juan L Ramos; Silvia Marqués
Journal:  Appl Environ Microbiol       Date:  2006-09-22       Impact factor: 4.792

7.  Growth phase-dependent transcription of the sigma(54)-dependent Po promoter controlling the Pseudomonas-derived (methyl)phenol dmp operon of pVI150.

Authors:  C C Sze; T Moore; V Shingler
Journal:  J Bacteriol       Date:  1996-07       Impact factor: 3.490

8.  The TACAN4TGCA motif upstream from the -35 region in the sigma70-sigmaS-dependent Pm promoter of the TOL plasmid is the minimum DNA segment required for transcription stimulation by XylS regulators.

Authors:  M T Gallegos; S Marqués; J L Ramos
Journal:  J Bacteriol       Date:  1996-11       Impact factor: 3.490

9.  TouR-mediated effector-independent growth phase-dependent activation of the sigma54 Ptou promoter of Pseudomonas stutzeri OX1.

Authors:  Dafne Solera; Fabio L G Arenghi; Tanja Woelk; Enrica Galli; Paola Barbieri
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

10.  Genetic evidence that catabolites of the Entner-Doudoroff pathway signal C source repression of the sigma54 Pu promoter of Pseudomonas putida.

Authors:  Francisco Velázquez; Ilaria di Bartolo; Víctor de Lorenzo
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

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