Literature DB >> 8166952

Structure solution by minimal-function phase refinement and Fourier filtering. II. Implementation and applications.

C M Weeks1, G T DeTitta, H A Hauptman, P Thuman, R Miller.   

Abstract

The minimal function, R(psi), has been used to provide the basis for a new computer-intensive direct-methods procedure that shows potential for providing fully automatic routine solutions for structures in the 200-400 atom range. This procedure, which has been called shake-and-bake, is an iterative process in which real-space filtering is alternated with phase refinement using a technique that reduces the value of R(psi). It has been successfully tested using experimental data for a dozen known structures ranging in size from 25 to 317 atoms and crystallizing in a variety of space groups. The details of this procedure, the parameters used and the results of these applications are described.

Mesh:

Year:  1994        PMID: 8166952     DOI: 10.1107/s0108767393008992

Source DB:  PubMed          Journal:  Acta Crystallogr A        ISSN: 0108-7673            Impact factor:   2.290


  5 in total

1.  Crystal structure of the flavoprotein ArsH from Sinorhizobium meliloti.

Authors:  Jun Ye; Hung-Chi Yang; Barry P Rosen; Hiranmoy Bhattacharjee
Journal:  FEBS Lett       Date:  2007-07-25       Impact factor: 4.124

2.  SnB version 2.3: triplet sieve phasing for centrosymmetric structures.

Authors:  Hongliang Xu; Alexander B Smith; Nikolaos V Sahinidis; Charles M Weeks
Journal:  J Appl Crystallogr       Date:  2008       Impact factor: 3.304

3.  The Shake-and-Bake structure determination of triclinic lysozyme.

Authors:  A M Deacon; C M Weeks; R Miller; S E Ealick
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-04       Impact factor: 11.205

4.  Crystal structure of a rigid four-spectrin-repeat fragment of the human desmoplakin plakin domain.

Authors:  Hee-Jung Choi; William I Weis
Journal:  J Mol Biol       Date:  2011-04-22       Impact factor: 5.469

5.  Crystal structure of the Lactococcus lactis formamidopyrimidine-DNA glycosylase bound to an abasic site analogue-containing DNA.

Authors:  Laurence Serre; Karine Pereira de Jésus; Serge Boiteux; Charles Zelwer; Bertrand Castaing
Journal:  EMBO J       Date:  2002-06-17       Impact factor: 11.598

  5 in total

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