Literature DB >> 8165185

Comparative molecular field analysis combined with physicochemical parameters for prediction of polydimethylsiloxane membrane flux in isopropanol.

R Liu1, L E Matheson.   

Abstract

Comparative molecular field analysis (CoMFA) combined with various physicochemical parameters were used to develop three-dimensional quantitative structure-transportability relationships (3-D QSTR) to predict membrane flux for 108 aromatic and heteroaromatic compounds through polydimethylsiloxane (PDMS) membranes in isopropyl alcohol (IPA). Sybyl, a comprehensive computational molecular modeling package, was used to analyze the data. Optimized molecular models were selected using molecular modeling techniques. Partial least-squares (PLS) regression combined with crossvalidation or bootstrapping was used as the statistical method to establish the predictive models. Prediction was good for the steady-state flux using both steric and electrostatic field descriptors combined with a functional group classification technique. Predictive ability was substantially increased in a model using CoMFA descriptors along with log mole fraction solubility for the penetrants in isopropanol, a hydrophobic term, fchex, which is used to estimate the partition coefficient between cyclohexane and water, and the addition of an intramolecular hydrogen bonding (IHB) term. The crossvalidated r2 and the conventional r2 for this model were 0.951 and 0.973, respectively. Excellent predictions are demonstrated for the membrane flux of the compounds both inside and outside the data domain.

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Year:  1994        PMID: 8165185     DOI: 10.1023/a:1018959525339

Source DB:  PubMed          Journal:  Pharm Res        ISSN: 0724-8741            Impact factor:   4.200


  4 in total

1.  Comparative molecular field analysis (CoMFA). 1. Effect of shape on binding of steroids to carrier proteins.

Authors:  R D Cramer; D E Patterson; J D Bunce
Journal:  J Am Chem Soc       Date:  1988-08-01       Impact factor: 15.419

2.  The development of a predictive method for the estimation of flux through polydimethylsiloxane membranes. III. Application to a series of substituted pyridines.

Authors:  M W Hu; L E Matheson
Journal:  Pharm Res       Date:  1993-05       Impact factor: 4.200

3.  The development of a predictive method for the estimation of flux through polydimethylsiloxane membranes. IV. Application to a series of substituted quinolines.

Authors:  L E Matheson; M W Hu
Journal:  Pharm Res       Date:  1993-06       Impact factor: 4.200

4.  Synthetic and computer-assisted analyses of the pharmacophore for the benzodiazepine receptor inverse agonist site.

Authors:  M S Allen; Y C Tan; M L Trudell; K Narayanan; L R Schindler; M J Martin; C Schultz; T J Hagen; K F Koehler; P W Codding
Journal:  J Med Chem       Date:  1990-09       Impact factor: 7.446

  4 in total
  2 in total

1.  Quantitative structure-permeation relationships for solute transport across silicone membranes.

Authors:  Sandrine Geinoz; Sebastien Rey; Gilles Boss; Annette L Bunge; Richard H Guy; Pierre-Alain Carrupt; Marianne Reist; Bernard Testa
Journal:  Pharm Res       Date:  2002-11       Impact factor: 4.200

2.  Ligand Classifier of Adaptively Boosting Ensemble Decision Stumps (LiCABEDS) and its application on modeling ligand functionality for 5HT-subtype GPCR families.

Authors:  Chao Ma; Lirong Wang; Xiang-Qun Xie
Journal:  J Chem Inf Model       Date:  2011-03-07       Impact factor: 4.956

  2 in total

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