Literature DB >> 8165127

Editing function of Escherichia coli cysteinyl-tRNA synthetase: cyclization of cysteine to cysteine thiolactone.

H Jakubowski1.   

Abstract

A cyclic sulfur compound, identified as cysteine thiolactone by several chemical and enzymatic tests, is formed from cysteine during in vitro tRNA(Cys) aminoacylation catalyzed by Escherichia coli cysteinyl-tRNA synthetase. The mechanism of cysteine thiolactone formation involves enzymatic deacylation of Cys-tRNA(Cys) (k = 0.017 s-1) in which nucleophilic sulfur of the side chain of cysteine in Cys-tRNA(Cys) attacks its carboxyl carbon to yield cysteine thiolactone. Nonenzymatic deacylation of Cys-tRNA(Cys) (k = 0.0006 s-1) yields cysteine, as expected. Inhibition of enzymatic deacylation of Cys-tRNA(Cys) by cysteine and Cys-AMP, but not by ATP, indicates that both synthesis of Cys-tRNA(Cys) and cyclization of cysteine to the thiolactone occur in a single active site of the enzyme. The cyclization of cysteine is mechanistically similar to the editing reactions of methionyl-tRNA synthetase. However, in contrast to methionyl-tRNA synthetase which needs the editing function to reject misactivated homocysteine, cysteinyl-tRNA synthetase is highly selective and is not faced with a problem in rejecting noncognate amino acids. Despite this, the present day cysteinyl-tRNA synthetase, like methionyl-tRNA synthetase, still retains an editing activity toward the cognate product, the charged tRNA. This function may be a remnant of a chemistry used by an ancestral cysteinyl-tRNA synthetase.

Entities:  

Mesh:

Substances:

Year:  1994        PMID: 8165127      PMCID: PMC523636          DOI: 10.1093/nar/22.7.1155

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  18 in total

1.  The determination of aminoacyl adenylate by thin-layer chromatography.

Authors:  H Z Jakubowski; A Pastuzyn; R B Loftfield
Journal:  Anal Biochem       Date:  1977-09       Impact factor: 3.365

2.  Proofreading in vivo: editing of homocysteine by methionyl-tRNA synthetase in Escherichia coli.

Authors:  H Jakubowski
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

3.  Establishing the misacylation/deacylation of the tRNA pathway for the editing mechanism of prokaryotic and eukaryotic valyl-tRNA synthetases.

Authors:  A R Fersht; C Dingwall
Journal:  Biochemistry       Date:  1979-04-03       Impact factor: 3.162

4.  Transfer ribonucleic acid synthetase catalyzed deacylation of aminoacyl transfer ribonucleic acid in the absence of adenosine monophosphate and pyrophosphate.

Authors:  A A Schreier; P R Schimmel
Journal:  Biochemistry       Date:  1972-04-25       Impact factor: 3.162

5.  Role of the beta-phosphate-gamma-phosphate interchange reaction of adenosine triphosphate in amino acid discrimination by valyl- and methionyl-tRNA synthetases from Escherichia coli.

Authors:  L T Smith; M Cohn
Journal:  Biochemistry       Date:  1981-01-20       Impact factor: 3.162

6.  An editing mechanism for the methionyl-tRNA synthetase in the selection of amino acids in protein synthesis.

Authors:  A R Fersht; C Dingwall
Journal:  Biochemistry       Date:  1979-04-03       Impact factor: 3.162

7.  Cysteinyl-tRNA synthetase from Escherichia coli does not need an editing mechanism to reject serine and alanine. High binding energy of small groups in specific molecular interactions.

Authors:  A R Fersht; C Dingwall
Journal:  Biochemistry       Date:  1979-04-03       Impact factor: 3.162

8.  The relationship between synthetic and editing functions of the active site of an aminoacyl-tRNA synthetase.

Authors:  H Y Kim; G Ghosh; L H Schulman; S Brunie; H Jakubowski
Journal:  Proc Natl Acad Sci U S A       Date:  1993-12-15       Impact factor: 11.205

9.  Alternative pathways for editing non-cognate amino acids by aminoacyl-tRNA synthetases.

Authors:  H Jakubowski; A R Fersht
Journal:  Nucleic Acids Res       Date:  1981-07-10       Impact factor: 16.971

10.  Sequence determination and modeling of structural motifs for the smallest monomeric aminoacyl-tRNA synthetase.

Authors:  Y M Hou; K Shiba; C Mottes; P Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-01       Impact factor: 11.205

View more
  4 in total

1.  Substrate-mediated fidelity mechanism ensures accurate decoding of proline codons.

Authors:  Byung Ran So; Songon An; Sandeep Kumar; Mom Das; Daniel A Turner; Christopher M Hadad; Karin Musier-Forsyth
Journal:  J Biol Chem       Date:  2011-07-18       Impact factor: 5.157

2.  Synthesis of cysteine-containing dipeptides by aminoacyl-tRNA synthetases.

Authors:  H Jakubowski
Journal:  Nucleic Acids Res       Date:  1995-11-25       Impact factor: 16.971

3.  Identification and characterization of differentially expressed transcripts in the gills of freshwater prawn (Macrobrachium rosenbergii) under salt stress.

Authors:  Hirak Kumar Barman; Swagat Kumar Patra; Varsha Das; Shibani Dutta Mohapatra; Pallipuram Jayasankar; Chinmayee Mohapatra; Ramya Mohanta; Rudra Prasanna Panda; Surya Narayan Rath
Journal:  ScientificWorldJournal       Date:  2012-04-19

Review 4.  Homocysteine Editing, Thioester Chemistry, Coenzyme A, and the Origin of Coded Peptide Synthesis †.

Authors:  Hieronim Jakubowski
Journal:  Life (Basel)       Date:  2017-02-09
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.