Literature DB >> 8152931

Construction of a normalized cDNA library by introduction of a semi-solid mRNA-cDNA hybridization system.

Y F Sasaki1, D Ayusawa, M Oishi.   

Abstract

We report a novel procedure to construct a normalized (equalized) cDNA library. By introduction of the highly efficient self-hybridization system between a whole mRNA population and their corresponding cDNA immobilized on latex beads, which involves relatively simple manipulations, we were able to generate an mRNA population in which the copy number of abundant species was reduced while that of rare species was enriched. In a typical experiment, after several cycles of self-hybridization on the beads, the ratio of the most to the least abundant marker mRNA species dropped by a factor of 300 (from 10,000 to 30) while the complexity and length of mRNAs in the population remained unchanged. The procedure should provide a potent tool for the expression cloning of cDNA and also facilitate the construction of whole cDNA catalogs from specific tissues (or cell types) from higher organisms.

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Year:  1994        PMID: 8152931      PMCID: PMC307919          DOI: 10.1093/nar/22.6.987

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  24 in total

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7.  A rapid and efficient purification of poly(A)-mRNA by oligo(dT)30-Latex.

Authors:  K Kuribayashi; M Hikata; O Hiraoka; C Miyamoto; Y Furuichi
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8.  Subtractive cDNA cloning using oligo(dT)30-latex and PCR: isolation of cDNA clones specific to undifferentiated human embryonal carcinoma cells.

Authors:  E Hara; T Kato; S Nakada; S Sekiya; K Oda
Journal:  Nucleic Acids Res       Date:  1991-12       Impact factor: 16.971

9.  Application of oligo(dT)30-latex for rapid purification of poly(A)+ mRNA and for hybrid subtraction with the in situ reverse transcribed cDNA.

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  15 in total

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6.  A simple semisolid subtraction method using carbodiimide-coated microplates.

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9.  Construction and characterization of a normalized cDNA library.

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10.  Consequences of normalizing transcriptomic and genomic libraries of plant genomes using a duplex-specific nuclease and tetramethylammonium chloride.

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