Literature DB >> 813997

Purine-nucleoside phosphorylase from Salmonella typhimurium and Escherichia coli. Initial velocity kinetics, ligand banding, and reaction mechanism.

K F Jensen.   

Abstract

Purine nucleoside phosphorylase from Salmonella typhimurium has been subjected to kinetic analysis i.e. determination of initial velocity patterns and product inhibition studies. The kinetic results suggest that the enzyme works by a sequential reaction mechanism, where the nucleoside, phosphate, and pentose 1-phosphate are all able to bind to the free enzyme, whereas it appears that the purine base binds after addition of the pentose 1-phosphate. The proposed mechanism is confirmed by substrate binding studies. In addition to the enzyme-substrate complexes suggested by the kinetics, the binding studies revealed a 'dead end' complex, consisting of enzyme, phosphate, and purine base. Similar binding experiments were carried out using the enzyme from Escherichia coli. The results suggest that this enzyme works by an identical reaction mechanism. The binding data are in agreement with the presence of six binding sites per native enzyme molecule, one binding site per subunit, for each ligand. Both enzymes show normal Michaelis-Menten kinetics for their substrates with the exception of phosphate, for which the double-reciprocal plots are concave down. This behaviour is seen in both binding and velocity curves, and most likely is a result of negative cooperativity in the binding of phosphate to the enzyme.

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Year:  1976        PMID: 813997     DOI: 10.1111/j.1432-1033.1976.tb10031.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  10 in total

1.  Isolation and characterization of mutations in the Escherichia coli regulatory protein XapR.

Authors:  C Jørgensen; G Dandanell
Journal:  J Bacteriol       Date:  1999-07       Impact factor: 3.490

2.  Identification of the tautomeric form of formycin A in its complex with Escherichia coli purine nucleoside phosphorylase based on the effect of enzyme-ligand binding on fluorescence and phosphorescence.

Authors:  Jakub Włodarczyk; Gerasim Stoychev Galitonov; Borys Kierdaszuk
Journal:  Eur Biophys J       Date:  2003-12-04       Impact factor: 1.733

3.  Purification and characterization of purine nucleoside phosphorylase from Proteus vulgaris.

Authors:  M Surette; T Gill; S MacLean
Journal:  Appl Environ Microbiol       Date:  1990-05       Impact factor: 4.792

4.  Crystal structure of Escherichia coli purine nucleoside phosphorylase in complex with 7-deazahypoxanthine.

Authors:  Vladimir I Timofeev; Nadezhda E Zhukhlistova; Yuliya A Abramchik; Ilya I Fateev; Maria A Kostromina; Tatiana I Muravieva; Roman S Esipov; Inna P Kuranova
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-05-23       Impact factor: 1.056

5.  Identification and characterization of genes (xapA, xapB, and xapR) involved in xanthosine catabolism in Escherichia coli.

Authors:  C Seeger; C Poulsen; G Dandanell
Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

6.  Cloning of a guanosine-inosine kinase gene of Escherichia coli and characterization of the purified gene product.

Authors:  H Mori; A Iida; S Teshiba; T Fujio
Journal:  J Bacteriol       Date:  1995-09       Impact factor: 3.490

7.  Purification and properties of inosine-guanosine phosphorylase from Escherichia coli K-12.

Authors:  G W Koszalka; J Vanhooke; S A Short; W W Hall
Journal:  J Bacteriol       Date:  1988-08       Impact factor: 3.490

8.  Synthesis of New 5'-Norcarbocyclic Aza/Deaza Purine Fleximers - Noncompetitive Inhibitors of E.coli Purine Nucleoside Phosphorylase.

Authors:  Anastasia Khandazhinskaya; Ilja Fateev; Irina Konstantinova; Roman Esipov; Konstantin Polyakov; Katherine Seley-Radtke; Sergey Kochetkov; Elena Matyugina
Journal:  Front Chem       Date:  2022-05-04       Impact factor: 5.545

9.  Role of ionization of the phosphate cosubstrate on phosphorolysis by purine nucleoside phosphorylase (PNP) of bacterial (E. coli) and mammalian (human) origin.

Authors:  Anna Modrak-Wójcik; Aneta Kirilenko; David Shugar; Borys Kierdaszuk
Journal:  Eur Biophys J       Date:  2007-07-17       Impact factor: 1.733

10.  Single tryptophan Y160W mutant of homooligomeric E. coli purine nucleoside phosphorylase implies that dimers forming the hexamer are functionally not equivalent.

Authors:  Marta Narczyk; Łukasz Mioduszewski; Aleksandra Oksiejuk; Maria Winiewska-Szajewska; Beata Wielgus-Kutrowska; Adrian Gojdź; Joanna Cieśla; Agnieszka Bzowska
Journal:  Sci Rep       Date:  2021-05-27       Impact factor: 4.379

  10 in total

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