Literature DB >> 8139536

The translation initiation factor eIF-4B contains an RNA-binding region that is distinct and independent from its ribonucleoprotein consensus sequence.

N Méthot1, A Pause, J W Hershey, N Sonenberg.   

Abstract

eIF-4B is a eukaryotic translation initiation factor that is required for the binding of ribosomes to mRNAs and the stimulation of the helicase activity of eIF-4A. It is an RNA-binding protein that contains a ribonucleoprotein consensus sequence (RNP-CS)/RNA recognition motif (RRM). We examined the effects of deletions and point mutations on the ability of eIF-4B to bind a random RNA, to cooperate with eIF-4A in RNA binding, and to enhance the helicase activity of eIF-4A. We report here that the RNP-CS/RRM alone is not sufficient for eIF-4B binding to RNA and that an RNA-binding region, located between amino acids 367 and 423, is the major contributor to RNA binding. Deletions which remove this region abolish the ability of eIF-4B to cooperate with eIF-4A in RNA binding and the ability to stimulate the helicase activity of eIF-4A. Point mutations in the RNP-CS/RRM had no effect on the ability of eIF-4B to cooperate with eIF-4A in RNA binding but significantly reduced the stimulation of eIF-4A helicase activity. Our results indicate that the carboxy-terminal RNA-binding region of eIF-4B is essential for eIF-4B function and is distinct from the RNP-CS/RRM.

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Year:  1994        PMID: 8139536      PMCID: PMC358597          DOI: 10.1128/mcb.14.4.2307-2316.1994

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  61 in total

1.  Bidirectional RNA helicase activity of eucaryotic translation initiation factors 4A and 4F.

Authors:  F Rozen; I Edery; K Meerovitch; T E Dever; W C Merrick; N Sonenberg
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

2.  Dissociation of double-stranded polynucleotide helical structures by eukaryotic initiation factors, as revealed by a novel assay.

Authors:  T G Lawson; K A Lee; M M Maimone; R D Abramson; T E Dever; W C Merrick; R E Thach
Journal:  Biochemistry       Date:  1989-05-30       Impact factor: 3.162

3.  RNA unwinding activity of SV40 large T antigen.

Authors:  M Scheffner; R Knippers; H Stahl
Journal:  Cell       Date:  1989-06-16       Impact factor: 41.582

Review 4.  RNA-binding proteins as developmental regulators.

Authors:  R J Bandziulis; M S Swanson; G Dreyfuss
Journal:  Genes Dev       Date:  1989-04       Impact factor: 11.361

5.  A common RNA recognition motif identified within a defined U1 RNA binding domain of the 70K U1 snRNP protein.

Authors:  C C Query; R C Bentley; J D Keene
Journal:  Cell       Date:  1989-04-07       Impact factor: 41.582

6.  Cap recognition and the entry of mRNA into the protein synthesis initiation cycle.

Authors:  R E Rhoads
Journal:  Trends Biochem Sci       Date:  1988-02       Impact factor: 13.807

7.  The mechanism of action of protein synthesis initiation factors from rabbit reticulocytes.

Authors:  R Benne; J W Hershey
Journal:  J Biol Chem       Date:  1978-05-10       Impact factor: 5.157

8.  Single-step purification of polypeptides expressed in Escherichia coli as fusions with glutathione S-transferase.

Authors:  D B Smith; K S Johnson
Journal:  Gene       Date:  1988-07-15       Impact factor: 3.688

9.  A novel genetic system to detect protein-protein interactions.

Authors:  S Fields; O Song
Journal:  Nature       Date:  1989-07-20       Impact factor: 49.962

10.  Identification of the RNA binding segment of human U1 A protein and definition of its binding site on U1 snRNA.

Authors:  D Scherly; W Boelens; W J van Venrooij; N A Dathan; J Hamm; I W Mattaj
Journal:  EMBO J       Date:  1989-12-20       Impact factor: 11.598

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  46 in total

1.  Crystallographic structure of the amino terminal domain of yeast initiation factor 4A, a representative DEAD-box RNA helicase.

Authors:  E R Johnson; D B McKay
Journal:  RNA       Date:  1999-12       Impact factor: 4.942

2.  Computational modeling of eukaryotic mRNA turnover.

Authors:  D Cao; R Parker
Journal:  RNA       Date:  2001-09       Impact factor: 4.942

3.  Characterization of a novel RNA-binding region of eIF4GI critical for ribosomal scanning.

Authors:  Déborah Prévôt; Didier Décimo; Cécile H Herbreteau; Florence Roux; Jérôme Garin; Jean-Luc Darlix; Théophile Ohlmann
Journal:  EMBO J       Date:  2003-04-15       Impact factor: 11.598

4.  Assembly of 48S translation initiation complexes from purified components with mRNAs that have some base pairing within their 5' untranslated regions.

Authors:  Sergei E Dmitriev; Ilya M Terenin; Yan E Dunaevsky; William C Merrick; Ivan N Shatsky
Journal:  Mol Cell Biol       Date:  2003-12       Impact factor: 4.272

Review 5.  Evolutionary conservation of reactions in translation.

Authors:  M Clelia Ganoza; Michael C Kiel; Hiroyuki Aoki
Journal:  Microbiol Mol Biol Rev       Date:  2002-09       Impact factor: 11.056

6.  Sce3, a suppressor of the Schizosaccharomyces pombe septation mutant cdc11, encodes a putative RNA-binding protein.

Authors:  S Schmidt; K Hofmann; V Simanis
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

7.  Identification and characterization of functionally critical, conserved motifs in the internal repeats and N-terminal domain of yeast translation initiation factor 4B (yeIF4B).

Authors:  Fujun Zhou; Sarah E Walker; Sarah F Mitchell; Jon R Lorsch; Alan G Hinnebusch
Journal:  J Biol Chem       Date:  2013-11-27       Impact factor: 5.157

8.  RNA aptamers to initiation factor 4A helicase hinder cap-dependent translation by blocking ATP hydrolysis.

Authors:  Akihiro Oguro; Takashi Ohtsu; Yuri V Svitkin; Nahum Sonenberg; Yoshikazu Nakamura
Journal:  RNA       Date:  2003-04       Impact factor: 4.942

9.  A region rich in aspartic acid, arginine, tyrosine, and glycine (DRYG) mediates eukaryotic initiation factor 4B (eIF4B) self-association and interaction with eIF3.

Authors:  N Méthot; M S Song; N Sonenberg
Journal:  Mol Cell Biol       Date:  1996-10       Impact factor: 4.272

10.  Phosphorylation of eucaryotic translation initiation factor 4B Ser422 is modulated by S6 kinases.

Authors:  Brian Raught; Franck Peiretti; Anne-Claude Gingras; Mark Livingstone; David Shahbazian; Greg L Mayeur; Roberto D Polakiewicz; Nahum Sonenberg; John W B Hershey
Journal:  EMBO J       Date:  2004-04-08       Impact factor: 11.598

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