Literature DB >> 8130522

Probabilistic constraint satisfaction with structural models: application to organ modeling by radial contours.

R B Altman1, J F Brinkley.   

Abstract

One of the key challenges within medical information sciences is the development of useful models for biological structure and its variability. Many biomedical problems involve the elucidation of structure (for example, from experimental data or from imaging studies), and structural models can often drive the process of inferring precise structure from data. Ideally, model-driven data interpretation combines knowledge about the generic features of a class of biological structures (as contained within a model) with data that provide specific information (often noisy) about a particular instance of the class. In this paper we briefly discuss model-driven determination of biological structure as an example of a structural constraint satisfaction problem. We describe a probabilistic implementation of structural constraint satisfaction, and show that our formulation of a particular organ modeling technology (Radial Contour Models) exhibits promising performance. Our results demonstrate the utility of probabilistic models for the solution of structural constraint satisfaction problems.

Mesh:

Year:  1993        PMID: 8130522      PMCID: PMC2850626     

Source DB:  PubMed          Journal:  Proc Annu Symp Comput Appl Med Care        ISSN: 0195-4210


  5 in total

1.  Hierarchical geometric constraint networks as a representation for spatial structural knowledge.

Authors:  J F Brinkley
Journal:  Proc Annu Symp Comput Appl Med Care       Date:  1992

2.  A model-based four-dimensional left ventricular surface detector.

Authors:  T L Faber; E M Stokely; R M Peshock; J R Corbett
Journal:  IEEE Trans Med Imaging       Date:  1991       Impact factor: 10.048

3.  Heuristic refinement method for determination of solution structure of proteins from nuclear magnetic resonance data.

Authors:  R B Altman; O Jardetzky
Journal:  Methods Enzymol       Date:  1989       Impact factor: 1.600

4.  The solution structures of Escherichia coli trp repressor and trp aporepressor at an intermediate resolution.

Authors:  C Arrowsmith; R Pachter; R Altman; O Jardetzky
Journal:  Eur J Biochem       Date:  1991-11-15

5.  Heuristic refinement method for the derivation of protein solution structures: validation on cytochrome b562.

Authors:  J F Brinkley; R B Altman; B S Duncan; B G Buchanan; O Jardetzky
Journal:  J Chem Inf Comput Sci       Date:  1988-11
  5 in total

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