Literature DB >> 8127664

Mutational analysis of the DNA binding domain A of chromosomal protein HMG1.

L Falciola1, A I Murchie, D M Lilley, M Bianchi.   

Abstract

We have mutated several residues of the first of the two HMG-boxes of mammalian HMG1. Some mutants cannot be produced in Escherichia coli, suggesting that the peptide fold is grossly disrupted. A few others can be produced efficiently and have normal DNA binding affinity and specificity; however, they are more sensitive towards heating and chaotropic agents than the wild type polypeptide. Significantly, the mutation of the single most conserved residue in the rather diverged HMG-box family falls in this 'in vitro temperature-sensitive' category, rather than in the non-folded category. Finally, two other mutants have reduced DNA binding affinity but unchanged binding specificity. Overall, it appears that whenever the HMG-box can fold, it will interact specifically with kinked DNA.

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Year:  1994        PMID: 8127664      PMCID: PMC523578          DOI: 10.1093/nar/22.3.285

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  36 in total

Review 1.  Structural features of the HMG chromosomal proteins and their genes.

Authors:  M Bustin; D A Lehn; D Landsman
Journal:  Biochim Biophys Acta       Date:  1990-07-30

2.  Isolation and characterization of maize cDNAs encoding a high mobility group protein displaying a HMG-box.

Authors:  K D Grasser; G Feix
Journal:  Nucleic Acids Res       Date:  1991-05-25       Impact factor: 16.971

3.  Similarity of human mitochondrial transcription factor 1 to high mobility group proteins.

Authors:  M A Parisi; D A Clayton
Journal:  Science       Date:  1991-05-17       Impact factor: 47.728

4.  Specific recognition of cruciform DNA by nuclear protein HMG1.

Authors:  M E Bianchi; M Beltrame; G Paonessa
Journal:  Science       Date:  1989-02-24       Impact factor: 47.728

5.  Solution structure of a DNA-binding domain from HMG1.

Authors:  C M Read; P D Cary; C Crane-Robinson; P C Driscoll; D G Norman
Journal:  Nucleic Acids Res       Date:  1993-07-25       Impact factor: 16.971

6.  Nucleolar transcription factor hUBF contains a DNA-binding motif with homology to HMG proteins.

Authors:  H M Jantzen; A Admon; S P Bell; R Tjian
Journal:  Nature       Date:  1990-04-26       Impact factor: 49.962

7.  A high-mobility-group protein and its cDNAs from Drosophila melanogaster.

Authors:  C R Wagner; K Hamana; S C Elgin
Journal:  Mol Cell Biol       Date:  1992-05       Impact factor: 4.272

8.  Ixr1, a yeast protein that binds to platinated DNA and confers sensitivity to cisplatin.

Authors:  S J Brown; P J Kellett; S J Lippard
Journal:  Science       Date:  1993-07-30       Impact factor: 47.728

9.  A bacteriophage T7 RNA polymerase/promoter system for controlled exclusive expression of specific genes.

Authors:  S Tabor; C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

10.  The DNA binding site of HMG1 protein is composed of two similar segments (HMG boxes), both of which have counterparts in other eukaryotic regulatory proteins.

Authors:  M E Bianchi; L Falciola; S Ferrari; D M Lilley
Journal:  EMBO J       Date:  1992-03       Impact factor: 11.598

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  14 in total

Review 1.  Regulation of DNA-dependent activities by the functional motifs of the high-mobility-group chromosomal proteins.

Authors:  M Bustin
Journal:  Mol Cell Biol       Date:  1999-08       Impact factor: 4.272

2.  Functions of the high mobility group protein, Abf2p, in mitochondrial DNA segregation, recombination and copy number in Saccharomyces cerevisiae.

Authors:  O Zelenaya-Troitskaya; S M Newman; K Okamoto; P S Perlman; R A Butow
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

3.  Homology model building of the HMG-1 box structural domain.

Authors:  A D Baxevanis; S H Bryant; D Landsman
Journal:  Nucleic Acids Res       Date:  1995-03-25       Impact factor: 16.971

4.  A novel activity of HMG domains: promotion of the triple-stranded complex formation between DNA containing (GGA/TCC)11 and d(GGA)11 oligonucleotides.

Authors:  T Suda; Y Mishima; K Takayanagi; H Asakura; S Odani; R Kominami
Journal:  Nucleic Acids Res       Date:  1996-12-01       Impact factor: 16.971

5.  Alanine mutagenesis of high-mobility-group-protein-1 box B (HMG1-B).

Authors:  S Taudte; H Xin; N R Kallenbach
Journal:  Biochem J       Date:  2000-05-01       Impact factor: 3.857

6.  Mutagenesis of the HMGB (high-mobility group B) protein Cmb1 (cytosine-mismatch binding 1) of Schizosaccharomyces pombe: effects on recognition of DNA mismatches and damage.

Authors:  Christophe Kunz; Karin Zurbriggen; Oliver Fleck
Journal:  Biochem J       Date:  2003-06-01       Impact factor: 3.857

Review 7.  HMGB1 in health and disease.

Authors:  Rui Kang; Ruochan Chen; Qiuhong Zhang; Wen Hou; Sha Wu; Lizhi Cao; Jin Huang; Yan Yu; Xue-Gong Fan; Zhengwen Yan; Xiaofang Sun; Haichao Wang; Qingde Wang; Allan Tsung; Timothy R Billiar; Herbert J Zeh; Michael T Lotze; Daolin Tang
Journal:  Mol Aspects Med       Date:  2014-07-08

8.  Synapsis of recombination signal sequences located in cis and DNA underwinding in V(D)J recombination.

Authors:  Mihai Ciubotaru; David G Schatz
Journal:  Mol Cell Biol       Date:  2004-10       Impact factor: 4.272

9.  The first high-mobility-group box of upstream binding factor assembles across-over DNA junction by basic residues.

Authors:  C H Hu; J M Wang; H B Tseng
Journal:  Biochem J       Date:  1998-07-01       Impact factor: 3.857

10.  Two mutations in the HMG-box with very different structural consequences provide insights into the nature of binding to four-way junction DNA.

Authors:  S H Teo; K D Grasser; C H Hardman; R W Broadhurst; E D Laue; J O Thomas
Journal:  EMBO J       Date:  1995-08-01       Impact factor: 11.598

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