Literature DB >> 8120900

Close packing of an oligomeric eye lens beta-crystallin induces loss of symmetry and ordering of sequence extensions.

V Nalini1, B Bax, H Driessen, D S Moss, P F Lindley, C Slingsby.   

Abstract

beta-Crystallins are oligomeric eye lens proteins that are related to monomeric gamma-crystallins. The main sequence difference between the two families is the presence of sequence extensions in the beta-crystallins. A major question concerns the role that these extensions play in mediating interactions at the high protein concentrations found in the lens. The predominant beta-crystallin polypeptide, beta B2, can be crystallized in two different space groups, I222 and C222. The I222 crystal structure revealed that the protein packed as a tetramer with perfect 222 symmetry but that the extensions were disordered. The X-ray structure of the C222 lattice of beta B2 has now been refined at 3.3 A, the structure analysed and compared with the I222 lattice. The protein is also a tetramer with 222 symmetry in the C222 lattice but differs in that parts of the N-terminal extensions have been visualized. In the asymmetric unit of the C222 lattice there are four subunits, each comprising a single polypeptide chain, in which certain flexible loops in the N-terminal domains and the N-terminal extensions have various conformations. The tetramers in the C222 lattice are more tightly packed than in the I222 form. Analysis of the tetramer contacts shows that the sites of interaction break the 222 symmetry of the tetramers. The N-terminal extensions play a major role in directing interactions between tetramers. One of the N-terminal extensions interacts with a hydrophobic patch on the N-terminal domain of another tetramer. These crystallographic observations obtained over a physiological concentration range indicate how, in beta-crystallin oligomers, the N-terminal extensions of beta B2 can switch from interacting with water to interacting with protein depending on their relative concentrations. This could be useful in maintaining a gradient of refractive index.

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Year:  1994        PMID: 8120900     DOI: 10.1016/0022-2836(94)90025-6

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  17 in total

1.  Ubiquitin proteasome pathway-mediated degradation of proteins: effects due to site-specific substrate deamidation.

Authors:  Edward J Dudek; Kirsten J Lampi; Jason A Lampi; Fu Shang; Jonathan King; Yongting Wang; Allen Taylor
Journal:  Invest Ophthalmol Vis Sci       Date:  2010-06-30       Impact factor: 4.799

2.  Deamidation in human lens betaB2-crystallin destabilizes the dimer.

Authors:  Kirsten J Lampi; Kencee K Amyx; Petra Ahmann; Eric A Steel
Journal:  Biochemistry       Date:  2006-03-14       Impact factor: 3.162

3.  The X-ray structure of a mutant eye lens beta B2-crystallin with truncated sequence extensions.

Authors:  B V Norledge; S Trinkl; R Jaenicke; C Slingsby
Journal:  Protein Sci       Date:  1997-08       Impact factor: 6.725

Review 4.  Function and Aggregation in Structural Eye Lens Crystallins.

Authors:  Kyle W Roskamp; Carolyn N Paulson; William D Brubaker; Rachel W Martin
Journal:  Acc Chem Res       Date:  2020-04-09       Impact factor: 22.384

Review 5.  Lens β-crystallins: the role of deamidation and related modifications in aging and cataract.

Authors:  Kirsten J Lampi; Phillip A Wilmarth; Matthew R Murray; Larry L David
Journal:  Prog Biophys Mol Biol       Date:  2014-03-06       Impact factor: 3.667

6.  Differences in solution dynamics between lens β-crystallin homodimers and heterodimers probed by hydrogen-deuterium exchange and deamidation.

Authors:  Kirsten J Lampi; Matthew R Murray; Matthew P Peterson; Bryce S Eng; Eileen Yue; Alice R Clark; Elisar Barbar; Larry L David
Journal:  Biochim Biophys Acta       Date:  2015-07-03

7.  The effect of N-terminal truncation on double-dimer assembly of goose delta-crystallin.

Authors:  Hwei-Jen Lee; Young-Hsang Lai; Su-Ying Wu; Yu-Hou Chen
Journal:  Biochem J       Date:  2005-12-15       Impact factor: 3.857

8.  Confidence intervals for fitting of atomic models into low-resolution densities.

Authors:  Niels Volkmann
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-06-20

9.  Deamidation alters the structure and decreases the stability of human lens betaA3-crystallin.

Authors:  Takumi Takata; Julie T Oxford; Theodore R Brandon; Kirsten J Lampi
Journal:  Biochemistry       Date:  2007-07-07       Impact factor: 3.162

10.  N-terminal extension of beta B1-crystallin: identification of a critical region that modulates protein interaction with beta A3-crystallin.

Authors:  Monika B Dolinska; Yuri V Sergeev; May P Chan; Ira Palmer; Paul T Wingfield
Journal:  Biochemistry       Date:  2009-10-13       Impact factor: 3.162

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