Literature DB >> 8120894

Crystal structure and refinement of cytochrome P450terp at 2.3 A resolution.

C A Hasemann1, K G Ravichandran, J A Peterson, J Deisenhofer.   

Abstract

Cytochrome P450terp is a class I (mitochondrial/bacterial) P450 that catalyzes the hydroxylation of alpha-terpineol as part of the catabolic assimilation of this compound by a pseudomonad species. Crystals grown from the purified protein have the symmetry of space group P6(1)22, and cell dimensions a = b = 69.4 A, c = 456.6 A, alpha = beta = 90 degrees, gamma = 120 degrees. Diffraction data were collected at the Cornell High Energy Synchrotron Source, and the structure of P450terp was solved by a combination of molecular replacement and multiple isomorphous replacement techniques. A model of P450terp was built and refined against native data, to an R-factor of 18.9% for data with I > or = sigma(I) between 6.0 A and 2.3 A resolution. This model contains 412 of the 428 P450terp amino acid residues; the loop between helices F and G is disordered in the crystal. While the overall fold of P450terp is very similar to that of P450cam, only three-quarters of the C alpha positions can be superimposed, to a root-mean-square deviation of only 1.87 A. The mode of substrate binding by P450terp can be predicted, and probable substrate contact residues identified. The heme environment and side-chain positions in the adjacent I-helix suggest possible modes of proton delivery in the catalytic cycle of the enzyme.

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Year:  1994        PMID: 8120894     DOI: 10.1016/0022-2836(94)90019-1

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  47 in total

1.  Theoretical investigation of substrate specificity for cytochromes P450 IA2, P450 IID6 and P450 IIIA4.

Authors:  F De Rienzo; F Fanelli; M C Menziani; P G De Benedetti
Journal:  J Comput Aided Mol Des       Date:  2000-01       Impact factor: 3.686

2.  Crystal structure of cytochrome P450 14alpha -sterol demethylase (CYP51) from Mycobacterium tuberculosis in complex with azole inhibitors.

Authors:  L M Podust; T L Poulos; M R Waterman
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

3.  Comparison of the dynamics of substrate access channels in three cytochrome P450s reveals different opening mechanisms and a novel functional role for a buried arginine.

Authors:  Peter J Winn; Susanna K Lüdemann; Ralph Gauges; Valère Lounnas; Rebecca C Wade
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

4.  Probing the open state of cytochrome P450cam with ruthenium-linker substrates.

Authors:  A R Dunn; I J Dmochowski; A M Bilwes; H B Gray; B R Crane
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-16       Impact factor: 11.205

5.  Single-molecule height measurements on microsomal cytochrome P450 in nanometer-scale phospholipid bilayer disks.

Authors:  Timothy H Bayburt; Stephen G Sligar
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-07       Impact factor: 11.205

6.  Structure of a cytochrome P450-redox partner electron-transfer complex.

Authors:  I F Sevrioukova; H Li; H Zhang; J A Peterson; T L Poulos
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-02       Impact factor: 11.205

Review 7.  Conformational plasticity and structure/function relationships in cytochromes P450.

Authors:  Thomas C Pochapsky; Sophia Kazanis; Marina Dang
Journal:  Antioxid Redox Signal       Date:  2010-10       Impact factor: 8.401

8.  Spring-loading the active site of cytochrome P450cam.

Authors:  Marina Dang; Susan Sondej Pochapsky; Thomas C Pochapsky
Journal:  Metallomics       Date:  2010-12-24       Impact factor: 4.526

Review 9.  Progress in molecular-genetic studies on congenital adrenal hyperplasia due to 11beta-hydroxylase deficiency.

Authors:  Li-Qiang Zhao; Su Han; Hao-Ming Tian
Journal:  World J Pediatr       Date:  2008-05       Impact factor: 2.764

Review 10.  Modeling kinetics of subcellular disposition of chemicals.

Authors:  Stefan Balaz
Journal:  Chem Rev       Date:  2009-05       Impact factor: 60.622

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